CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002932326
(
Xenopus tropicalis
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02946 (GTF2I)
IPR004212
XP_002932326
T203587_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF2I
M10621_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFIII_Q6_01
0.856
0.856
GTF2I
M10622_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFIII_Q6
0.856
0.856
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002932326
GTF2I-like
107
181
LQKSVEDLFCICYGKALGKSTPVPVPYDKMVRDPTAVSVTGLPKDVFVKDPSNYDLETVTQILHNRSQVSFSIKR
XP_002932326
GTF2I-like
305
379
LRKQVEELFEKKYAQAINVTGPVAIPYHLFQSNTEDLYVEGLPEGIPFRRPSTYGIPRLERILLARERIRFVIKK
XP_002932326
GTF2I-like
409
483
LRKIVDQLFSKKFAEALGKTEAMSVPYQKFEANPAEMYVEGLPDNIPFRSPSWYGIPRLEKIIQVGNRIKFVIKK
XP_002932326
GTF2I-like
514
588
LRKQVEEIFNTKFAQALGLPEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSAKIKFIVKK
XP_002932326
GTF2I-like
669
743
LKQKVEALFDEKCGEALGLNEPYKVPFALFESYPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNRAKIKFVIKK
XP_002932326
GTF2I-like
802
876
LREQVNELFSKKFGEAIGMNFPVKVPYRKITTNPGCVVVDGMPPGVSFKAPSYLEMSSMRRILDSAEFIKFTVIR
Links
Other
GTF2I-like
family TFs
Other
Xenopus tropicalis
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gtf2i.S
Xenopus laevis
XB-GENE-1217444
I
0.940
ENSAMEG00000015241
Ailuropoda melanoleuca
ENSAMEG00000015241
I
0.856
GTF2I
Bos taurus
ENSBTAG00000009780
I
0.856
GTF2I
Canis familiaris
ENSCAFG00000011514
I
0.856
ENSDNOG00000000823
Dasypus novemcinctus
ENSDNOG00000000823
I
0.856
GTF2I
Felis catus
ENSFCAG00000002617
I
0.856
GTF2I
Homo sapiens
ENSG00000263001
D
0.856
GTF2I
Myotis lucifugus
ENSMLUG00000002844
I
0.856
GTF2I
Macaca mulatta
ENSMMUG00000006823
I
0.856
GTF2I
Monodelphis domestica
ENSMODG00000007022
I
0.856
ENSMPUG00000016156
Mustela putorius furo
ENSMPUG00000016156
I
0.856
ENSOARG00000011276
Ovis aries
ENSOARG00000011276
I
0.856
GTF2I
Otolemur garnettii
ENSOGAG00000029837
I
0.856
ENSPANG00000010876
Papio anubis
ENSPANG00000010876
I
0.856
GTF2I
Pan troglodytes
ENSPTRG00000019293
I
0.856
GTF2I
Pteropus vampyrus
ENSPVAG00000005365
I
0.856
GTF2I
Sus scrofa
ENSSSCG00000007721
I
0.856
ENSBTAP00000012902-D1
Bos grunniens
ENSBTAP00000012902-D1
I
0.856
ENSP00000322542
Macaca fascicularis
ENSP00000322542
I
0.856
Myotis_brandtii_GTF2I_10014287
Myotis brandtii
Myotis_brandtii_GTF2I_10014287
I
0.856
Pvit_17518
Pogona vitticeps
Pvit_17518
I
0.856
GTF2I
Cavia porcellus
ENSCPOG00000004071
I
0.853
GTF2I
Equus caballus
ENSECAG00000020289
I
0.853
ENSLACG00000018432
Latimeria chalumnae
ENSLACG00000018432
I
0.853
GTF2I
Loxodonta africana
ENSLAFG00000003646
I
0.853
Gtf2i
Mus musculus
ENSMUSG00000060261
I
0.853
ENSPSIG00000011811
Pelodiscus sinensis
ENSPSIG00000011811
I
0.853
Gtf2i
Rattus norvegicus
ENSRNOG00000001479
I
0.853
GTF2I
Oryctolagus cuniculus
ENSOCUG00000002063
I
0.847
GTF2I
Vicugna pacos
ENSVPAG00000008515
I
0.847
GTF2I
Callithrix jacchus
ENSCJAG00000016182
I
0.844
ENSCSAG00000018227
Chlorocebus sabaeus
ENSCSAG00000018227
I
0.844
GTF2I
Ornithorhynchus anatinus
ENSOANG00000012919
I
0.844
ENSAPLG00000005397
Anas platyrhynchos
ENSAPLG00000005397
I
0.842
Afo_R005310
Aptenodytes forsteri
Afo_R005310
I
0.840
Cmyd_10014807
Chelonia mydas
Cmyd_10014807
I
0.833
GTF2I
Meleagris gallopavo
ENSMGAG00000002373
I
0.831
ENSPPYG00000017484
Pongo abelii
ENSPPYG00000017484
I
0.831
GTF2I
Gallus gallus
ENSGALG00000021665
I
0.822
Alligator_sinensis_CCG003098.5
Alligator sinensis
Alligator_sinensis_CCG003098.5
I
0.822
Aan_R007260
Calypte anna
Aan_R007260
I
0.764
Gfo_R013538
Geospiza fortis
Gfo_R013538
I
0.744
Tal_R004165
Tyto alba
Tal_R004165
I
0.738
GTF2I
Taeniopygia guttata
ENSTGUG00000003714
I
0.736
ENSFALG00000007065
Ficedula albicollis
ENSFALG00000007065
I
0.722