LotgiG138494 (Lottia gigantea)
Ets

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00178 (Ets) IPR000418 LotgiG138494 T177445_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EHF
M02987_2.00 		Homo sapiens
NACCCGGAAGTD
HACTTCCGGGTN		 SELEX
Jolma et al.(2013)
EHF_1 		0.968 0.728
EHF
M02733_2.00 		Homo sapiens
ACCCGGAART
AYTTCCGGGT		 SELEX
Jolma et al.(2010)
EHF_full_length_monomer 		0.968 0.728
EHF
M09053_2.00 		Homo sapiens
NNANVAGGAAGTDVV
BBHACTTCCTBNTNN		 Misc
Kulakovskiy et al.(2013)
EHF_HUMAN.H11MO.0.B 		0.968 0.728
EHF
M09533_2.00 		Homo sapiens
WNVMGGAARY
RYTTCCKBNW		 Misc
Heinz et al.(2010)
LoVo-EHF_GSE49402 		0.968 0.728
EHF
M10500_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EHF_Q6 		0.968 0.728
Elf3
M00156_2.00 		Mus musculus
NNVVGGAARN
NYTTCCBBNN		 PBM
Badis et al.(2009)
Elf3_3876 		0.959 0.704
Elf3
M01476_2.00 		Mus musculus
NNNNRDAWVN
NBWTHYNNNN		 PBM
Wei et al.(2010)
Elf3 		0.959 0.704
ELF3
M03002_2.00 		Homo sapiens
WACCCGGAAGTR
YACTTCCGGGTW		 SELEX
Jolma et al.(2013)
ELF3_1 		0.959 0.704
ELF3
M03003_2.00 		Homo sapiens
WACCCGGAAGTRD
HYACTTCCGGGTW		 SELEX
Jolma et al.(2013)
ELF3_2 		0.959 0.704
ELF3
M04788_2.00 		Homo sapiens
ACSCGGAAGTRVNNNNNNDWWWW
WWWWHNNNNNNBYACTTCCGSGT		 SELEX
Yin et al.(2017)
ELF3_FL_HT-SELEX_1 		0.959 0.704
ELF3
M04789_2.00 		Homo sapiens
NTGTGCGGATGCV
BGCATCCGCACAN		 SELEX
Yin et al.(2017)
ELF3_FL_HT-SELEX_2 		0.959 0.704
ELF3
M04783_2.00 		Homo sapiens
ACVCGGAAGTRNNNNNNNNWWWW
WWWWNNNNNNNNYACTTCCGBGT		 SELEX
Yin et al.(2017)
ELF3_eDBD_HT-SELEX_1 		0.959 0.704
ELF3
M04784_2.00 		Homo sapiens
VATAACGGATGYN
NRCATCCGTTATB		 SELEX
Yin et al.(2017)
ELF3_eDBD_HT-SELEX_2 		0.959 0.704
ELF3
M04785_2.00 		Homo sapiens
VATDGCGGATGCN
NGCATCCGCHATB		 SELEX
Yin et al.(2017)
ELF3_eDBD_HT-SELEX_3 		0.959 0.704
ELF3
M04786_2.00 		Homo sapiens
NWTRCGGAWGCN
NGCWTCCGYAWN		 SELEX
Yin et al.(2017)
ELF3_eDBD_HT-SELEX_4 		0.959 0.704
ELF3
M09060_2.00 		Homo sapiens
NNANVAGGAARTDV
BHAYTTCCTBNTNN		 Misc
Kulakovskiy et al.(2013)
ELF3_HUMAN.H11MO.0.A 		0.959 0.704
Elf3
M09066_2.00 		Mus musculus
NNANVAGGAARTDV
BHAYTTCCTBNTNN		 Misc
Kulakovskiy et al.(2013)
ELF3_MOUSE.H11MO.0.B 		0.959 0.704
ELF3
M10515_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ESE1_Q3 		0.959 0.704
ELF3
M10516_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ESE1_Q6 		0.959 0.704
ELF3
M04787_2.00 		Homo sapiens
ACVAGGAAGTRVNNNNNNWWWWW
WWWWWNNNNNNBYACTTCCTBGT		 SELEX
Yin et al.(2017)
ELF3_eDBD_Methyl-HT-SELEX 		0.959 0.704
ELF3
M04790_2.00 		Homo sapiens
ACMAGGAAGTAVNDDHNHDAWWW
WWWTHDNDHHNBTACTTCCTKGT		 SELEX
Yin et al.(2017)
ELF3_FL_Methyl-HT-SELEX 		0.959 0.704
Ehf
M00158_2.00 		Mus musculus
DNVMGGAARY
RYTTCCKBNH		 PBM
Badis et al.(2009)
Ehf_3056 		0.941 0.704
Ehf
M01484_2.00 		Mus musculus
DNVMGGAARY
RYTTCCKBNH		 PBM
Wei et al.(2010)
Ehf 		0.941 0.704
Ehf
M09071_2.00 		Mus musculus
NNANVAGGAAGTDVV
BBHACTTCCTBNTNN		 Misc
Kulakovskiy et al.(2013)
EHF_MOUSE.H11MO.0.B 		0.941 0.704
Etv6
M01491_2.00 		Mus musculus
NNNVGGAARH
DYTTCCBNNN		 PBM
Wei et al.(2010)
Etv6 		0.856 0.420
Etv6
M09077_2.00 		Mus musculus
NSAGGAARB
VYTTCCTSN		 Misc
Kulakovskiy et al.(2013)
ETV6_MOUSE.H11MO.0.C 		0.856 0.420
Eip74EF
M03723_2.00 		Drosophila melanogaster
WACCCGGAAGTR
YACTTCCGGGTW		 SELEX
Nitta et al.(2015)
Eip74EF_1 		0.821 0.481
Eip74EF
M03724_2.00 		Drosophila melanogaster
WABSCGGAAGTR
YACTTCCGSVTW		 SELEX
Nitta et al.(2015)
Eip74EF_2 		0.821 0.481
Eip74EF
M06186_2.00 		Drosophila melanogaster
WHMAGGAAKT
AMTTCCTKDW		 B1H
Zhu et al.(2011)
Eip74EF_FlyReg_FBgn0000567 		0.821 0.481
Eip74EF
M06187_2.00 		Drosophila melanogaster
ACCCGGAAGT
ACTTCCGGGT		 B1H
Zhu et al.(2011)
Eip74EF_SANGER_5_FBgn0000567 		0.821 0.481
Eip74EF
M02679_2.00 		Drosophila melanogaster
CMGGAAR
YTTCCKG		 SELEX
Mathelier et al.(2014)
MA0026.1 		0.821 0.481
Eip74EF
M09667_2.00 		Drosophila melanogaster
VWHMMGGAART
AYTTCCKKDWB		 Misc
Kulakovskiy et al.(2009)
Eip74EF 		0.821 0.481
Eip74EF
M10521_2.00 		Drosophila melanogaster
NNAAYCMGGAARTNNDV
BHNNAYTTCCKGRWTNN		 Transfac
Matys et al.(2006)
I$E74A_01 		0.821 0.481
Elf5
M01490_2.00 		Mus musculus
DNVVGGAARH
DYTTCCBBNH		 PBM
Wei et al.(2010)
Elf5 		0.808 0.617
ELF5
M02988_2.00 		Homo sapiens
WNVMGGAAGTN
NACTTCCKBNW		 SELEX
Jolma et al.(2013)
ELF5_1 		0.808 0.617
ELF5
M02989_2.00 		Homo sapiens
WNVMGGAARYN
NRYTTCCKBNW		 SELEX
Jolma et al.(2013)
ELF5_2 		0.808 0.617
Elf5
M03011_2.00 		Mus musculus
WNVMGGAARYN
NRYTTCCKBNW		 SELEX
Jolma et al.(2013)
Elf5_1 		0.808 0.617
ELF5
M04756_2.00 		Homo sapiens
NDNVMGGAAGBD
HVCTTCCKBNHN		 SELEX
Yin et al.(2017)
ELF5_eDBD_HT-SELEX 		0.808 0.617
ELF5
M04758_2.00 		Homo sapiens
NAMCCGGAAGYN
NRCTTCCGGKTN		 SELEX
Yin et al.(2017)
ELF5_FL_HT-SELEX 		0.808 0.617
ELF5
M09054_2.00 		Homo sapiens
VVVANVMGGAAGHDV
BHDCTTCCKBNTBBB		 Misc
Kulakovskiy et al.(2013)
ELF5_HUMAN.H11MO.0.A 		0.808 0.617
Elf5
M09076_2.00 		Mus musculus
RGRAVRAGGAAGDRRNN
NNYYHCTTCCTYBTYCY		 Misc
Kulakovskiy et al.(2013)
ELF5_MOUSE.H11MO.0.A 		0.808 0.617
ELF5
M09534_2.00 		Homo sapiens
ABVMGGAAGT
ACTTCCKBVT		 Misc
Heinz et al.(2010)
T47D-ELF5_GSE30407 		0.808 0.617
ELF5
M10501_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ELF5_01 		0.808 0.617
ELF5
M04757_2.00 		Homo sapiens
NABVAGGAAGTD
HACTTCCTBVTN		 SELEX
Yin et al.(2017)
ELF5_eDBD_Methyl-HT-SELEX 		0.808 0.617
ELF5
M04759_2.00 		Homo sapiens
DABVAGGAAGTD
HACTTCCTBVTH		 SELEX
Yin et al.(2017)
ELF5_FL_Methyl-HT-SELEX 		0.808 0.617
ETV7
M04712_2.00 		Homo sapiens
VVGGAAGYRCTTCCBB
VVGGAAGYRCTTCCBB		 SELEX
Yin et al.(2017)
ETV7_FL_HT-SELEX_1 		0.807 0.407
ETV7
M04713_2.00 		Homo sapiens
RYTTCCSGGAARY
RYTTCCSGGAARY		 SELEX
Yin et al.(2017)
ETV7_FL_HT-SELEX_2 		0.807 0.407
ETV7
M10471_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEL2_Q6 		0.807 0.407
ETV7
M04714_2.00 		Homo sapiens
NNGGAAGYRCTTCCNN
NNGGAAGYRCTTCCNN		 SELEX
Yin et al.(2017)
ETV7_FL_Methyl-HT-SELEX_1 		0.807 0.407
ETV7
M04715_2.00 		Homo sapiens
RYTTCCNGGAARY
RYTTCCNGGAARY		 SELEX
Yin et al.(2017)
ETV7_FL_Methyl-HT-SELEX_2 		0.807 0.407
For this family, TFs with SR scores > 0.717 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP138494 Ets 116 197

Links

Other Ets family TFs
Other Lottia gigantea TFs

518 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC055 Arabidopsis thaliana AT3G15500 D 0.000
NAC019 Arabidopsis thaliana AT1G52890 D 0.000
Carubv10014211m.g Capsella rubella Carubv10014211m.g I 0.000
Pm011604 Prunus mume Pm011604 I 0.000
Carubv10009816m.g Capsella rubella Carubv10009816m.g I 0.000
Carubv10005353m.g Capsella rubella Carubv10005353m.g I 0.000
Cagra.0946s0025 Capsella grandiflora Cagra.0946s0025 I 0.000
Cagra.0570s0027 Capsella grandiflora Cagra.0570s0027 I 0.000
Cagra.0007s0097 Capsella grandiflora Cagra.0007s0097 I 0.000
Bostr.7867s0562 Boechera stricta Bostr.7867s0562 I 0.000
Bostr.28625s0149 Boechera stricta Bostr.28625s0149 I 0.000
Bostr.0124s0082 Boechera stricta Bostr.0124s0082 I 0.000
Aquca_024_00080 Aquilegia coerulea Aquca_024_00080 I 0.000
mgf013765m Mimulus guttatus mgf013765m I 0.000
mgf001766m Mimulus guttatus mgf001766m I 0.000
Cucsa.341800 Cucumis sativus Cucsa.341800 I 0.000
Cucsa.074610 Cucumis sativus Cucsa.074610 I 0.000
cassava42313.valid.m1 Manihot esculenta cassava42313.valid.m1 I 0.000
cassava2098.valid.m1 Manihot esculenta cassava2098.valid.m1 I 0.000
28219.m000090 Ricinus communis 28219.m000090 I 0.000
LjSGA_036303.1 Lotus japonicus LjSGA_036303.1 I 0.000
SapurV1A.0044s0420 Salix purpurea SapurV1A.0044s0420 I 0.000
chr3.CM0590.390.nd Lotus japonicus chr3.CM0590.390.nd I 0.000
PK20135.1 Cannabis sativa PK20135.1 I 0.000
PK08629.1 Cannabis sativa PK08629.1 I 0.000
Thhalv10025818m.g Eutrema salsugineum Thhalv10025818m.g I 0.000
Thhalv10021174m.g Eutrema salsugineum Thhalv10021174m.g I 0.000
Thhalv10011676m.g Eutrema salsugineum Thhalv10011676m.g I 0.000
SapurV1A.1471s0010 Salix purpurea SapurV1A.1471s0010 I 0.000
SapurV1A.0864s0080 Salix purpurea SapurV1A.0864s0080 I 0.000
SapurV1A.0127s0020 Salix purpurea SapurV1A.0127s0020 I 0.000
Ciclev10008812m.g Citrus clementina Ciclev10008812m.g I 0.000
orange1.1g019011m.g Citrus sinensis orange1.1g019011m.g I 0.000
MDP0000262032 Malus domestica MDP0000262032 I 0.000
MDP0000132623 Malus domestica MDP0000132623 I 0.000
Gorai.009G433200 Gossypium raimondii Gorai.009G433200 I 0.000
Gorai.002G073700 Gossypium raimondii Gorai.002G073700 I 0.000
gene31149-v1.0-hybrid Fragaria vesca gene31149-v1.0-hybrid I 0.000
evm.TU.supercontig_80.93 Carica papaya evm.TU.supercontig_80.93 I 0.000
Eucgr.F01093 Eucalyptus grandis Eucgr.F01093 I 0.000
Bra019052 Brassica rapa Bra019052 I 0.000
Pm011603 Prunus mume Pm011603 I 0.000
GLYMA12G22880 Glycine max GLYMA12G22880 I 0.000
GLYMA06G38410 Glycine max GLYMA06G38410 I 0.000
RD26 Arabidopsis lyrata fgenesh2_kg.7__1491__AT4G27410.3 I 0.000
ATNAC3 Arabidopsis lyrata fgenesh2_kg.3__1697__AT3G15500.1 I 0.000
ANAC019 Arabidopsis lyrata fgenesh2_kg.1__4367__AT1G52890.1 I 0.000
Bra027238 Brassica rapa Bra027238 I 0.000
Bra026353 Brassica rapa Bra026353 I 0.000
Bra021113 Brassica rapa Bra021113 I 0.000
GLYMA12G35000 Glycine max GLYMA12G35000 I 0.000
Bra018998 Brassica rapa Bra018998 I 0.000
Bra001596 Brassica rapa Bra001596 I 0.000
Bo7g111390 Brassica oleracea Bo7g111390 I 0.000
Bo6g030940 Brassica oleracea Bo6g030940 I 0.000
Bo5g127040 Brassica oleracea Bo5g127040 I 0.000
Bo3g066850 Brassica oleracea Bo3g066850 I 0.000
Bo1g128450 Brassica oleracea Bo1g128450 I 0.000
Bo1g048300 Brassica oleracea Bo1g048300 I 0.000
RD26 Arabidopsis thaliana AT4G27410 I 0.000
POPTR_0011s12400 Populus trichocarpa POPTR_0011s12400 I 0.000
Cla023770 Citrullus lanatus Cla023770 I 0.000
Cla011949 Citrullus lanatus Cla011949 I 0.000
Ca_21186 Cicer arietinum Ca_21186 I 0.000
VIT_19s0014g03290 Vitis vinifera VIT_19s0014g03290 I 0.000
TCM_031364 Theobroma cacao TCM_031364 I 0.000
Solyc07g063410.2 Solanum lycopersicum Solyc07g063410.2 I 0.000
PRUPE_ppa008301mg Prunus persica PRUPE_ppa008301mg I 0.000
PRUPE_ppa007577mg Prunus persica PRUPE_ppa007577mg I 0.000
POPTR_1659s00200 Populus trichocarpa POPTR_1659s00200 I 0.000
GLYMA13G35550 Glycine max GLYMA13G35550 I 0.000
POPTR_0011s04650 Populus trichocarpa POPTR_0011s04650 I 0.000
POPTR_0001s41460 Populus trichocarpa POPTR_0001s41460 I 0.000
PGSC0003DMG400019294 Solanum tuberosum PGSC0003DMG400019294 I 0.000
PGSC0003DMG400015342 Solanum tuberosum PGSC0003DMG400015342 I 0.000
MTR_8g059170 Medicago truncatula MTR_8g059170 I 0.000
MTR_2g079990 Medicago truncatula MTR_2g079990 I 0.000
GLYMA19G28476 Glycine max GLYMA19G28476 I 0.000
GLYMA16G04740 Glycine max GLYMA16G04740 I 0.000
Eucgr.K01471 Eucalyptus grandis Eucgr.K01471 N 0.000