CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf013765m
(
Mimulus guttatus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
mgf013765m
T297087_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC055
M00976_2.00
Arabidopsis thaliana
RYACGKAAN
NTTMCGTRY
PBM
Lindemose et al.(2014)
ANAC055
0.883
0.842
NAC055
M00885_2.00
Arabidopsis thaliana
TTACGTD
HACGTAA
PBM
Franco-Zorrilla et al.(2014)
ANAC55
0.883
0.842
NAC055
M07207_2.00
Arabidopsis thaliana
DDNYNWNWNNNDYACGKMWYY
RRWKMCGTRHNNNWNWNRNHH
Dap-seq
OMalley et al.(2016)
ANAC055_col
0.883
0.842
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf013765m
NAC/NAM
15
138
PPGFRFYPTDEELMVKYLCRKIAGHHFPLQVIGDVDLYKFDAWDLPSKALFGEKEWYFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Mimulus guttatus
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0570s0027
Capsella grandiflora
Cagra.0570s0027
I
0.926
Bostr.7867s0562
Boechera stricta
Bostr.7867s0562
I
0.926
mgf001766m
Mimulus guttatus
mgf001766m
I
0.926
Carubv10005353m.g
Capsella rubella
Carubv10005353m.g
I
0.926
RD26
Arabidopsis lyrata
fgenesh2_kg.7__1491__AT4G27410.3
I
0.926
RD26
Arabidopsis thaliana
AT4G27410
I
0.926
Cucsa.341800
Cucumis sativus
Cucsa.341800
I
0.921
Cla023770
Citrullus lanatus
Cla023770
I
0.913
Bo7g111390
Brassica oleracea
Bo7g111390
I
0.913
Thhalv10025818m.g
Eutrema salsugineum
Thhalv10025818m.g
I
0.913
Bra019052
Brassica rapa
Bra019052
I
0.913
Bo1g048300
Brassica oleracea
Bo1g048300
I
0.910
Bra026353
Brassica rapa
Bra026353
I
0.910
Gorai.002G073700
Gossypium raimondii
Gorai.002G073700
I
0.908
cassava2098.valid.m1
Manihot esculenta
cassava2098.valid.m1
I
0.901
Aquca_024_00080
Aquilegia coerulea
Aquca_024_00080
I
0.893
28219.m000090
Ricinus communis
28219.m000090
I
0.889
PGSC0003DMG400019294
Solanum tuberosum
PGSC0003DMG400019294
I
0.888
cassava42313.valid.m1
Manihot esculenta
cassava42313.valid.m1
I
0.887
MTR_2g079990
Medicago truncatula
MTR_2g079990
I
0.886
ATNAC3
Arabidopsis lyrata
fgenesh2_kg.3__1697__AT3G15500.1
I
0.883
NAC055
Arabidopsis thaliana
AT3G15500
D
0.883
PK20135.1
Cannabis sativa
PK20135.1
I
0.882
Solyc07g063410.2
Solanum lycopersicum
Solyc07g063410.2
I
0.882
Bostr.28625s0149
Boechera stricta
Bostr.28625s0149
I
0.881
POPTR_1659s00200
Populus trichocarpa
POPTR_1659s00200
I
0.881
Bo5g127040
Brassica oleracea
Bo5g127040
I
0.881
Bra027238
Brassica rapa
Bra027238
I
0.881
Thhalv10021174m.g
Eutrema salsugineum
Thhalv10021174m.g
I
0.881
POPTR_0001s41460
Populus trichocarpa
POPTR_0001s41460
I
0.881
Bo1g128450
Brassica oleracea
Bo1g128450
I
0.881
Gorai.009G433200
Gossypium raimondii
Gorai.009G433200
I
0.881
Bra021113
Brassica rapa
Bra021113
I
0.881
GLYMA12G35000
Glycine max
GLYMA12G35000
I
0.879
SapurV1A.0864s0080
Salix purpurea
SapurV1A.0864s0080
I
0.879
SapurV1A.1471s0010
Salix purpurea
SapurV1A.1471s0010
I
0.879
orange1.1g019011m.g
Citrus sinensis
orange1.1g019011m.g
I
0.878
chr3.CM0590.390.nd
Lotus japonicus
chr3.CM0590.390.nd
I
0.878
Ciclev10008812m.g
Citrus clementina
Ciclev10008812m.g
I
0.878
GLYMA13G35550
Glycine max
GLYMA13G35550
I
0.878
PGSC0003DMG400015342
Solanum tuberosum
PGSC0003DMG400015342
I
0.878
Pm011603
Prunus mume
Pm011603
I
0.875
PRUPE_ppa008301mg
Prunus persica
PRUPE_ppa008301mg
I
0.874
Solyc12g013620.1
Solanum lycopersicum
Solyc12g013620.1
I
0.872
TCM_031364
Theobroma cacao
TCM_031364
I
0.870