Bra040696 (Brassica rapa)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 Bra040696 T179111_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FAR1
M06880_2.00 		Arabidopsis thaliana
NNYHCACGCGCYDNH
DNHRGCGCGTGDRNN		 Dap-seq
OMalley et al.(2016)
FAR1_col_a 		0.867 0.867
FAR1
M06881_2.00 		Arabidopsis thaliana
NNNNBDNDNNYHCACGCGCYD
HRGCGCGTGDRNNHNHVNNNN		 Dap-seq
OMalley et al.(2016)
FAR1_colamp_a 		0.867 0.867
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra040696.1-P FAR1 70 159

Links

Other FAR1 family TFs
Other Brassica rapa TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0012s02040 Populus trichocarpa POPTR_0012s02040 N
SapurV1A.0174s0200 Salix purpurea SapurV1A.0174s0200 N
SapurV1A.0174s0210 Salix purpurea SapurV1A.0174s0210 N
SapurV1A.2031s0010 Salix purpurea SapurV1A.2031s0010 N
SapurV1A.4391s0010 Salix purpurea SapurV1A.4391s0010 N