cassava30288.valid.m1 (Manihot esculenta)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 cassava30288.valid.m1 T181044_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava30288.valid.m1 FAR1 74 162

Links

Other FAR1 family TFs
Other Manihot esculenta TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.005G016700 Gossypium raimondii Gorai.005G016700 N 0.955
cassava38728.m1 Manihot esculenta cassava38728.m1 N 0.966
Cucsa.094440 Cucumis sativus Cucsa.094440 N 0.944
mgf020729m Mimulus guttatus mgf020729m N 0.888
Bostr.20903s0171 Boechera stricta Bostr.20903s0171 N 0.809
Cagra.5954s0021 Capsella grandiflora Cagra.5954s0021 N 0.809
Carubv10017836m.g Capsella rubella Carubv10017836m.g N 0.809
Ciclev10021841m.g Citrus clementina Ciclev10021841m.g N 0.955
evm.TU.supercontig_195.42 Carica papaya evm.TU.supercontig_195.42 N 0.989
gene21527-v1.0-hybrid Fragaria vesca gene21527-v1.0-hybrid N 0.711
gene21669-v1.0-hybrid Fragaria vesca gene21669-v1.0-hybrid N 0.978
27914.m000423 Ricinus communis 27914.m000423 N 0.978
Gorai.005G126700 Gossypium raimondii Gorai.005G126700 N 0.978
MDP0000141128 Malus domestica MDP0000141128 N 0.704
MDP0000348552 Malus domestica MDP0000348552 N 0.955
MDP0000618200 Malus domestica MDP0000618200 N 0.989
orange1.1g025532m.g Citrus sinensis orange1.1g025532m.g N 0.955
SapurV1A.0834s0190 Salix purpurea SapurV1A.0834s0190 N 0.910
SapurV1A.1078s0040 Salix purpurea SapurV1A.1078s0040 N 0.910
SapurV1A.4098s0020 Salix purpurea SapurV1A.4098s0020 N 0.955
Thhalv10006173m.g Eutrema salsugineum Thhalv10006173m.g N 0.809
PK13380.1 Cannabis sativa PK13380.1 N 0.966
POPTR_0017s05780 Populus trichocarpa POPTR_0017s05780 N 0.933
Bo6g076470 Brassica oleracea Bo6g076470 N 0.820
Bo8g093280 Brassica oleracea Bo8g093280 N 0.798
Bra003377 Brassica rapa Bra003377 N 0.820
GLYMA11G13610 Glycine max GLYMA11G13610 N 0.899
GLYMA12G05600 Glycine max GLYMA12G05600 N 0.888
GLYMA15G03440 Glycine max GLYMA15G03440 N 0.933
MTR_2g098920 Medicago truncatula MTR_2g098920 N 0.888
MTR_4g067290 Medicago truncatula MTR_4g067290 N 0.888
PGSC0003DMG402027016 Solanum tuberosum PGSC0003DMG402027016 N 0.955
POPTR_0007s01870 Populus trichocarpa POPTR_0007s01870 N 0.944
AT3G59470 Arabidopsis thaliana AT3G59470 N 0.787
PRUPE_ppa008878mg Prunus persica PRUPE_ppa008878mg N 0.711
PRUPE_ppa011567mg Prunus persica PRUPE_ppa011567mg N 1.000
scaffold_503155.1 Arabidopsis lyrata scaffold_503155.1 N 0.787
Solyc06g073200.2 Solanum lycopersicum Solyc06g073200.2 N 0.936
TCM_020020 Theobroma cacao TCM_020020 N 0.978
VIT_05s0102g00690 Vitis vinifera VIT_05s0102g00690 N 0.989
Ca_02686 Cicer arietinum Ca_02686 N 0.910
Cla010925 Citrullus lanatus Cla010925 N 0.944
Pm003725 Prunus mume Pm003725 N 0.711