Cagra.5954s0021 (Capsella grandiflora)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Cagra.5954s0021 T181261_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.5954s0021.1.p FAR1 103 191

Links

Other FAR1 family TFs
Other Capsella grandiflora TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.005G016700 Gossypium raimondii Gorai.005G016700 N 0.798
cassava30288.valid.m1 Manihot esculenta cassava30288.valid.m1 N 0.809
cassava38728.m1 Manihot esculenta cassava38728.m1 N 0.787
Cucsa.094440 Cucumis sativus Cucsa.094440 N 0.809
mgf020729m Mimulus guttatus mgf020729m N 0.764
Bostr.20903s0171 Boechera stricta Bostr.20903s0171 N 1.000
Carubv10017836m.g Capsella rubella Carubv10017836m.g N 1.000
Ciclev10021841m.g Citrus clementina Ciclev10021841m.g N 0.831
evm.TU.supercontig_195.42 Carica papaya evm.TU.supercontig_195.42 N 0.809
gene21669-v1.0-hybrid Fragaria vesca gene21669-v1.0-hybrid N 0.798
27914.m000423 Ricinus communis 27914.m000423 N 0.787
Gorai.005G126700 Gossypium raimondii Gorai.005G126700 N 0.798
MDP0000348552 Malus domestica MDP0000348552 N 0.773
MDP0000618200 Malus domestica MDP0000618200 N 0.820
orange1.1g025532m.g Citrus sinensis orange1.1g025532m.g N 0.831
SapurV1A.0834s0190 Salix purpurea SapurV1A.0834s0190 N 0.764
SapurV1A.1078s0040 Salix purpurea SapurV1A.1078s0040 N 0.764
SapurV1A.4098s0020 Salix purpurea SapurV1A.4098s0020 N 0.787
Thhalv10006173m.g Eutrema salsugineum Thhalv10006173m.g N 1.000
PK13380.1 Cannabis sativa PK13380.1 N 0.787
POPTR_0007s01870 Populus trichocarpa POPTR_0007s01870 N 0.787
Bo6g076470 Brassica oleracea Bo6g076470 N 0.978
Bo8g093280 Brassica oleracea Bo8g093280 N 0.989
Bra003377 Brassica rapa Bra003377 N 0.989
GLYMA11G13610 Glycine max GLYMA11G13610 N 0.742
GLYMA12G05600 Glycine max GLYMA12G05600 N 0.753
GLYMA15G03440 Glycine max GLYMA15G03440 N 0.764
MTR_2g098920 Medicago truncatula MTR_2g098920 N 0.787
MTR_4g067290 Medicago truncatula MTR_4g067290 N 0.798
PGSC0003DMG402027016 Solanum tuberosum PGSC0003DMG402027016 N 0.798
AT3G59470 Arabidopsis thaliana AT3G59470 N 0.978
POPTR_0017s05780 Populus trichocarpa POPTR_0017s05780 N 0.775
PRUPE_ppa011567mg Prunus persica PRUPE_ppa011567mg N 0.809
scaffold_503155.1 Arabidopsis lyrata scaffold_503155.1 N 0.978
Solyc06g073200.2 Solanum lycopersicum Solyc06g073200.2 N 0.787
TCM_020020 Theobroma cacao TCM_020020 N 0.787
VIT_05s0102g00690 Vitis vinifera VIT_05s0102g00690 N 0.798
Ca_02686 Cicer arietinum Ca_02686 N 0.787
Cla010925 Citrullus lanatus Cla010925 N 0.809