CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.010G116000
(
Gossypium raimondii
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Gorai.010G116000
T181508_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.010G116000.1
FAR1
63
148
DFYNIYAKEQGFGIRVSNSWFRTKKKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMVVIRLVDSKRWRIVEVELEHNHQVKM
Links
Other
FAR1
family TFs
Other
Gossypium raimondii
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
D918_01175
Trichuris suis
D918_01175
I
TTRE_0000156401
Trichuris trichiura
TTRE_0000156401
I
TMUE_s0064002300
Trichuris muris
TMUE_s0064002300
I
TCNE_0001220201
Toxocara canis
TCNE_0001220201
I
TCLT_0000472801
Thelazia callipaeda
TCLT_0000472801
I
SMUV_0001104401
Syphacia muris
SMUV_0001104401
I
nOo.2.0.1.g07043
Onchocerca ochengi
nOo.2.0.1.g07043
I
nLs.2.1.2.g09168
Litomosoides sigmodontis
nLs.2.1.2.g09168
I
nDi.2.2.2.g10740
Dirofilaria immitis
nDi.2.2.2.g10740
I
EVEC_0000549701
Enterobius vermicularis
EVEC_0000549701
I
DME_0000608401
Dracunculus medinensis
DME_0000608401
I
WUBG_04696
Wuchereria bancrofti
WUBG_04696
I
D917_07972
Trichinella nativa
D917_07972
I
BXY_0993100
Bursaphelenchus xylophilus
BXY_0993100
I
BTMF_0000836601
Brugia timori
BTMF_0000836601
I
ASU_05469
Ascaris suum
ASU_05469
I
WBGene00238199
Onchocerca volvulus
WBGene00238199
I
LOAG_11444
Loa loa
LOAG_11444
I
EFV52614
Trichinella spiralis
EFV52614
I
DAPPUDRAFT_319330
Daphnia pulex
DAPPUDRAFT_319330
I
Bm3574
Brugia malayi
Bm3574
I
MhA1_Contig1748.frz3.gene3
Meloidogyne hapla
MhA1_Contig1748.frz3.gene3
N
Minc14190
Meloidogyne incognita
Minc14190
N
Ppa-blmp-1
Pristionchus pacificus
PPA04977
N
snap_masked-nMf.1.1.scaf01565-processed-gene-0.4
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf01565-processed-gene-0.4
N