CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.012G021400
(
Gossypium raimondii
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Gorai.012G021400
T181517_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.012G021400.1
FAR1
65
141
TFYDGYARQLGFSTHVGQFTRATPDGPIVTWDFACSREVFKRKNVESCNAMFRIERKDGGKWIATKFVEDHNHSMVT
Gorai.012G021400.2
FAR1
65
141
TFYDGYARQLGFSTHVGQFTRATPDGPIVTWDFACSREVFKRKNVESCNAMFRIERKDGGKWIATKFVEDHNHSMVT
Gorai.012G021400.3
FAR1
65
141
TFYDGYARQLGFSTHVGQFTRATPDGPIVTWDFACSREVFKRKNVESCNAMFRIERKDGGKWIATKFVEDHNHSMVT
Gorai.012G021400.4
FAR1
65
141
TFYDGYARQLGFSTHVGQFTRATPDGPIVTWDFACSREVFKRKNVESCNAMFRIERKDGGKWIATKFVEDHNHSMVT
Links
Other
FAR1
family TFs
Other
Gossypium raimondii
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA08G24400
Glycine max
GLYMA08G24400
N
0.753
POPTR_0008s01240
Populus trichocarpa
POPTR_0008s01240
N
0.740
PRUPE_ppa001310mg
Prunus persica
PRUPE_ppa001310mg
N
0.805
TCM_044608
Theobroma cacao
TCM_044608
N
0.922
VIT_13s0047g00330
Vitis vinifera
VIT_13s0047g00330
N
0.805
cassava1556.valid.m1
Manihot esculenta
cassava1556.valid.m1
N
0.727
Ciclev10000255m.g
Citrus clementina
Ciclev10000255m.g
N
0.844
gene00378-v1.0-hybrid
Fragaria vesca
gene00378-v1.0-hybrid
N
0.753
Gorai.011G224000
Gossypium raimondii
Gorai.011G224000
N
0.896
MDP0000318097
Malus domestica
MDP0000318097
N
0.779
orange1.1g035792m.g
Citrus sinensis
orange1.1g035792m.g
N
0.844
SapurV1A.0070s0640
Salix purpurea
SapurV1A.0070s0640
N
0.740