CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene00378-v1.0-hybrid
(
Fragaria vesca
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
gene00378-v1.0-hybrid
T181391_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna00378.1-v1.0-hybrid
FAR1
58
134
ALYDAYARCAGFSTHVGQFTRNKPDGPIVTWEFACSREVFRKKNVESCNAMLRVERKDANTWVATKFIEDHNHSMES
Links
Other
FAR1
family TFs
Other
Fragaria vesca
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa001310mg
Prunus persica
PRUPE_ppa001310mg
N
0.818
MDP0000318097
Malus domestica
MDP0000318097
N
0.792
Gorai.011G224000
Gossypium raimondii
Gorai.011G224000
N
0.753
Gorai.012G021400
Gossypium raimondii
Gorai.012G021400
N
0.753
TCM_044608
Theobroma cacao
TCM_044608
N
0.740
Ciclev10000255m.g
Citrus clementina
Ciclev10000255m.g
N
0.740
orange1.1g035792m.g
Citrus sinensis
orange1.1g035792m.g
N
0.740
cassava1556.valid.m1
Manihot esculenta
cassava1556.valid.m1
N
0.727
GLYMA08G24400
Glycine max
GLYMA08G24400
N
0.714
VIT_13s0047g00330
Vitis vinifera
VIT_13s0047g00330
N
0.714
SapurV1A.0070s0640
Salix purpurea
SapurV1A.0070s0640
N
0.701