CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Bb01348
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Bb01348
T181677_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Bb01348.1.p
FAR1
54
134
DYYNLYSWEIGFGIRYGRSRTNSNNYRTRQDLVCSCQGQSTSATTKTCHRGCPAMIRLLRTQDHGWYISRFVKDHNHDLSD
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo7g031620
Brassica oleracea
Bo7g031620
N
Bra015090
Brassica rapa
Bra015090
N
fgenesh2_kg.3__2704__AT3G24860.1
Arabidopsis lyrata
fgenesh2_kg.3__2704__AT3G24860.1
N
Bostr.19424s0134
Boechera stricta
Bostr.19424s0134
N
Cagra.5961s0001
Capsella grandiflora
Cagra.5961s0001
N
Carubv10014242m.g
Capsella rubella
Carubv10014242m.g
N
Thhalv10002843m.g
Eutrema salsugineum
Thhalv10002843m.g
N