CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE28480
(
Caenorhabditis remanei
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
CRE28480
T184964_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
daf-16
M10574_2.00
Caenorhabditis elegans
RNHGTAAACAANHN
NDNTTGTTTACDNY
Transfac
Matys et al.(2006)
N$DAF16_01
0.834
0.976
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE28480
Forkhead
164
254
GEESYSDIIAKALESAPDGRLKLNEIYQWFSDNIPYFRERSSQEEAAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPEAKPGRNPRR
Links
Other
Forkhead
family TFs
Other
Caenorhabditis remanei
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0147s0016
Capsella grandiflora
Cagra.0147s0016
N
chr1.LjT14G19.90.nc
Lotus japonicus
chr1.LjT14G19.90.nc
N
PK20247.1
Cannabis sativa
PK20247.1
N
Thhalv10019058m.g
Eutrema salsugineum
Thhalv10019058m.g
N
SapurV1A.0002s0060
Salix purpurea
SapurV1A.0002s0060
N
MDP0000168614
Malus domestica
MDP0000168614
N
Lus10035067.g
Linum usitatissimum
Lus10035067.g
N
Lus10017892.g
Linum usitatissimum
Lus10017892.g
N
Eucgr.K01091
Eucalyptus grandis
Eucgr.K01091
N
Carubv10020880m.g
Capsella rubella
Carubv10020880m.g
N
WHY2
Arabidopsis thaliana
AT1G71260
N
Bostr.10273s0220
Boechera stricta
Bostr.10273s0220
N
mgf015710m
Mimulus guttatus
mgf015710m
N
cassava24783.valid.m1
Manihot esculenta
cassava24783.valid.m1
N
Pm022821
Prunus mume
Pm022821
N
Solyc11g044750.1
Solanum lycopersicum
Solyc11g044750.1
N
ATWHY2
Arabidopsis lyrata
scaffold_202038.1
N
PRUPE_ppa011529mg
Prunus persica
PRUPE_ppa011529mg
N
GLYMA19G43880
Glycine max
GLYMA19G43880
N
GLYMA03G41270
Glycine max
GLYMA03G41270
N