CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_chr_1000450
(
Mycosphaerella graminicola
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
fgenesh1_pg.C_chr_1000450
T189313_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
fgenesh1_pg.C_chr_1000450
M01020_2.00
Mycosphaerella graminicola
NNVCACNNN
NNNGTGBNN
PBM
Nakagawa et al.(2013)
Fox3_Mgra
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.664
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01020_2.00
Forkhead
16
102
KPNMTYIYIIDEVLQNIEGGQADLQAIYDKIMKRWPYYKYKVGSLGWQSSVRHNLLSCERFRDAGKSGKGKLWAINHEHPLDNKKRK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_chr_1000450
Forkhead
1260
1346
KPNMTYIYIIDEVLQNIEGGQADLQAIYDKIMKRWPYYKYKVGSLGWQSSVRHNLLSCERFRDAGKSGKGKLWAINHEHPLDNKKRK
Links
Other
Forkhead
family TFs
Other
Mycosphaerella graminicola
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_04361
Aspergillus nidulans
CADANIAG00006097
I
fgenesh1_pm.00609_#_584
Aspergillus carbonarius
fgenesh1_pm.00609_#_584
I
estExt_fgeneshPB_pg.C_60206
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_60206
I
GSTUM_00004031001
Tuber melanosporum
GSTUM_00004031001
I
EURHEDRAFT_472160
Aspergillus ruber
EURHEDRAFT_472160
I
CADAFLAG00005079
Aspergillus flavus
CADAFLAG00005079
I
CADAORAG00008017
Aspergillus oryzae
CADAORAG00008017
I
ATEG_05575
Aspergillus terreus
CADATEAG00004870
I
Moror_278
Moniliophthora roreri
Moror_278
N
e_gw1.1.2325.1
Heterobasidion annosum
e_gw1.1.2325.1
N
SERLA73DRAFT_176185
Serpula lacrymans
SERLA73DRAFT_176185
N
SCLCIDRAFT_1210571
Scleroderma citrinum
SCLCIDRAFT_1210571
N
SCHCODRAFT_104239
Schizophyllum commune
SCHCODRAFT_104239
N
PLEOSDRAFT_165977
Pleurotus ostreatus
PLEOSDRAFT_165977
N
PISMIDRAFT_57266
Pisolithus microcarpus
PISMIDRAFT_57266
N
PILCRDRAFT_5774
Piloderma croceum
PILCRDRAFT_5774
N
PAXRUDRAFT_823784
Paxillus rubicundulus
PAXRUDRAFT_823784
N
MPER_09631
Moniliophthora perniciosa
MPER_09631
N
CY34DRAFT_797070
Suillus luteus
CY34DRAFT_797070
N
M422DRAFT_166226
Sphaerobolus stellatus
M422DRAFT_166226
N
M413DRAFT_7311
Hebeloma cylindrosporum
M413DRAFT_7311
N
M404DRAFT_1002346
Pisolithus tinctorius
M404DRAFT_1002346
N
LACBIDRAFT_301720
Laccaria bicolor
LACBIDRAFT_301720
N
JAAARDRAFT_105377
Jaapia argillacea
JAAARDRAFT_105377
N
HETIRDRAFT_244485
Heterobasidion irregulare
HETIRDRAFT_244485
N
GLOTRDRAFT_90337
Gloeophyllum trabeum
GLOTRDRAFT_90337
N
GALMADRAFT_82940
Galerina marginata
GALMADRAFT_82940
N
CC1G_13211
Coprinopsis cinerea
CC1G_13211
N