CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh1_pg.C_chr_1000450
(
Mycosphaerella graminicola
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
fgenesh1_pg.C_chr_1000450
T189313_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
fgenesh1_pg.C_chr_1000450
M01020_2.00
Mycosphaerella graminicola
NNVCACNNN
NNNGTGBNN
PBM
Nakagawa et al.(2013)
Fox3_Mgra
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.664
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01020_2.00
Forkhead
16
102
KPNMTYIYIIDEVLQNIEGGQADLQAIYDKIMKRWPYYKYKVGSLGWQSSVRHNLLSCERFRDAGKSGKGKLWAINHEHPLDNKKRK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_chr_1000450
Forkhead
1260
1346
KPNMTYIYIIDEVLQNIEGGQADLQAIYDKIMKRWPYYKYKVGSLGWQSSVRHNLLSCERFRDAGKSGKGKLWAINHEHPLDNKKRK
Links
Other
Forkhead
family TFs
Other
Mycosphaerella graminicola
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Mycgr3G89033
Zymoseptoria tritici
Mycgr3G89033
I
0.785
DOTSEDRAFT_98485
Dothistroma septosporum
DOTSEDRAFT_98485
I
0.699