CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0000559201
(
Ascaris lumbricoides
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
ALUE_0000559201
T190252_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
daf-16
M10574_2.00
Caenorhabditis elegans
RNHGTAAACAANHN
NDNTTGTTTACDNY
Transfac
Matys et al.(2006)
N$DAF16_01
0.801
0.892
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000559201-mRNA-1
Forkhead
138
228
GEESYSDLIAKALECAPEKRMKLNEIYQWFASNIAYFRDRASAEEAAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPRR
Links
Other
Forkhead
family TFs
Other
Ascaris lumbricoides
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava46929.m1
Manihot esculenta
cassava46929.m1
N
0.000
SapurV1A.0423s0120
Salix purpurea
SapurV1A.0423s0120
N
0.000
orange1.1g038084m.g
Citrus sinensis
orange1.1g038084m.g
N
0.000
orange1.1g037241m.g
Citrus sinensis
orange1.1g037241m.g
N
0.000
MDP0000713910
Malus domestica
MDP0000713910
N
0.000
Gorai.013G045100
Gossypium raimondii
Gorai.013G045100
N
0.000
Gorai.002G135000
Gossypium raimondii
Gorai.002G135000
N
0.000
Eucgr.G01493
Eucalyptus grandis
Eucgr.G01493
N
0.000
Ciclev10030106m.g
Citrus clementina
Ciclev10030106m.g
N
0.000
Ciclev10003973m.g
Citrus clementina
Ciclev10003973m.g
N
0.000
mgf020647m
Mimulus guttatus
mgf020647m
N
0.000
cassava9129.m1
Manihot esculenta
cassava9129.m1
N
0.000
cassava47360.m1
Manihot esculenta
cassava47360.m1
N
0.000
GLYMA02G11500
Glycine max
GLYMA02G11500
N
0.000
29801.m003163
Ricinus communis
29801.m003163
N
0.000
Pm021290
Prunus mume
Pm021290
N
0.000
Cla016266
Citrullus lanatus
Cla016266
N
0.000
Ca_16375
Cicer arietinum
Ca_16375
N
0.000
VIT_18s0001g10300
Vitis vinifera
VIT_18s0001g10300
N
0.000
RGE1
Vitis vinifera
VIT_03s0063g00170
N
0.000
TCM_033803
Theobroma cacao
TCM_033803
N
0.000
TCM_007083
Theobroma cacao
TCM_007083
N
0.000
PRUPE_ppa022683mg
Prunus persica
PRUPE_ppa022683mg
N
0.000
POPTR_0014s02600
Populus trichocarpa
POPTR_0014s02600
N
0.000
GSMUA_Achr9G08780_001
Musa acuminata
GSMUA_Achr9G08780_001
N
0.000