CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ALUE_0000559201
(
Ascaris lumbricoides
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
ALUE_0000559201
T190252_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
daf-16
M10574_2.00
Caenorhabditis elegans
RNHGTAAACAANHN
NDNTTGTTTACDNY
Transfac
Matys et al.(2006)
N$DAF16_01
0.801
0.892
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000559201-mRNA-1
Forkhead
138
228
GEESYSDLIAKALECAPEKRMKLNEIYQWFASNIAYFRDRASAEEAAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPRR
Links
Other
Forkhead
family TFs
Other
Ascaris lumbricoides
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_05583
Ascaris suum
ASU_05583
I
0.835
TCNE_0000984601
Toxocara canis
TCNE_0000984601
I
0.835
ACOC_0001009801
Angiostrongylus costaricensis
ACOC_0001009801
I
0.834
L596_g21623
Steinernema carpocapsae
L596_g21623
I
0.833
L889_g26642
Steinernema feltiae
L889_g26642
I
0.833
L893_g8649
Steinernema glaseri
L893_g8649
I
0.833
PTRK_0000872800
Parastrongyloides trichosuri
PTRK_0000872800
I
0.828
SPAL_0000140300
Strongyloides papillosus
SPAL_0000140300
I
0.828
SVE_0221800
Strongyloides venezuelensis
SVE_0221800
I
0.828
snap_masked-nMf.1.1.scaf25582-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf25582-processed-gene-0.1
I
0.818
MhA1_Contig353.frz3.fgene4
Meloidogyne hapla
MhA1_Contig353.frz3.fgene4
I
0.811
CRE28480
Caenorhabditis remanei
CRE28480
I
0.810
L892_g28207
Steinernema scapterisci
L892_g28207
I
0.809
daf-16
Caenorhabditis elegans
WBGene00000912
D
0.801
SMUV_0000148401
Syphacia muris
SMUV_0000148401
I
0.798
RSKR_0000006600
Rhabditophanes kr3021
RSKR_0000006600
I
0.785
GPLIN_001276900
Globodera pallida
GPLIN_001276900
I
0.753
TCLT_0000249001
Thelazia callipaeda
TCLT_0000249001
I
0.715
WUBG_10392
Wuchereria bancrofti
WUBG_10392
I
0.710
Bm5392
Brugia malayi
Bm5392
I
0.710
WBGene00237302
Onchocerca volvulus
WBGene00237302
I
0.710
BTMF_0000986201
Brugia timori
BTMF_0000986201
I
0.710
nDi.2.2.2.g01961
Dirofilaria immitis
nDi.2.2.2.g01961
I
0.710
nOo.2.0.1.g05753
Onchocerca ochengi
nOo.2.0.1.g05753
I
0.710
nOo.2.0.1.g07140
Onchocerca ochengi
nOo.2.0.1.g07140
I
0.710
OFLC_0000193701
Onchocerca flexuosa
OFLC_0000193701
I
0.710
nLs.2.1.2.g00563
Litomosoides sigmodontis
nLs.2.1.2.g00563
I
0.672
nAv.1.0.1.g02965
Acanthocheilonema viteae
nAv.1.0.1.g02965
I
0.665