CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCLT_0000249001
(
Thelazia callipaeda
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
TCLT_0000249001
T191229_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
daf-16
M10574_2.00
Caenorhabditis elegans
RNHGTAAACAANHN
NDNTTGTTTACDNY
Transfac
Matys et al.(2006)
N$DAF16_01
0.733
0.756
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TCLT_0000249001-mRNA-1
Forkhead
128
217
EGSYSQLITQALNCAPNGRLKLSEIYTWFMCNIPYFGARSTPQLSSAWKNSIRHNLSLHNRFMRVQNEGAGKSSWWMINPDAKPGRNPRR
Links
Other
Forkhead
family TFs
Other
Thelazia callipaeda
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
daf-16
Caenorhabditis elegans
WBGene00000912
D
0.733
SMUV_0000148401
Syphacia muris
SMUV_0000148401
I
0.727
CRE28480
Caenorhabditis remanei
CRE28480
I
0.723
L892_g28207
Steinernema scapterisci
L892_g28207
I
0.723
PTRK_0000872800
Parastrongyloides trichosuri
PTRK_0000872800
I
0.717
SPAL_0000140300
Strongyloides papillosus
SPAL_0000140300
I
0.717
SVE_0221800
Strongyloides venezuelensis
SVE_0221800
I
0.717
ACOC_0001009801
Angiostrongylus costaricensis
ACOC_0001009801
I
0.715
ALUE_0000559201
Ascaris lumbricoides
ALUE_0000559201
I
0.715
ASU_05583
Ascaris suum
ASU_05583
I
0.715
L596_g21623
Steinernema carpocapsae
L596_g21623
I
0.715
L889_g26642
Steinernema feltiae
L889_g26642
I
0.715
L893_g8649
Steinernema glaseri
L893_g8649
I
0.715
TCNE_0000984601
Toxocara canis
TCNE_0000984601
I
0.715
snap_masked-nMf.1.1.scaf25582-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf25582-processed-gene-0.1
I
0.714
nAv.1.0.1.g02965
Acanthocheilonema viteae
nAv.1.0.1.g02965
I
0.711
nLs.2.1.2.g00563
Litomosoides sigmodontis
nLs.2.1.2.g00563
I
0.707
MhA1_Contig353.frz3.fgene4
Meloidogyne hapla
MhA1_Contig353.frz3.fgene4
I
0.702
GPLIN_001276900
Globodera pallida
GPLIN_001276900
I
0.681
RSKR_0000006600
Rhabditophanes kr3021
RSKR_0000006600
I
0.666