CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000358101
(
Syphacia muris
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
SMUV_0000358101
T191079_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXK2
M08118_2.00
Homo sapiens
NNRTAAACANN
NNTGTTTAYNN
ChIP-seq
Mathelier et al.(2014)
MA1103.1
0.664
0.635
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000358101-mRNA-1
Forkhead
27
101
KPPYSYAQLIAQAIMSTPDKQITLSGIYSFIIQKYPWYQTCDRGWQNSIRHNLSLSRYFIKVFFTTAFCYGMNMQ
Links
Other
Forkhead
family TFs
Other
Syphacia muris
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.10273s0220
Boechera stricta
Bostr.10273s0220
N
0.000
chr1.LjT14G19.90.nc
Lotus japonicus
chr1.LjT14G19.90.nc
N
0.000
Thhalv10019058m.g
Eutrema salsugineum
Thhalv10019058m.g
N
0.000
SapurV1A.0002s0060
Salix purpurea
SapurV1A.0002s0060
N
0.000
orange1.1g026312m.g
Citrus sinensis
orange1.1g026312m.g
N
0.000
MDP0000168614
Malus domestica
MDP0000168614
N
0.000
Lus10035067.g
Linum usitatissimum
Lus10035067.g
N
0.000
Lus10017892.g
Linum usitatissimum
Lus10017892.g
N
0.000
evm.TU.supercontig_249.9
Carica papaya
evm.TU.supercontig_249.9
N
0.000
Eucgr.K01091
Eucalyptus grandis
Eucgr.K01091
N
0.000
Carubv10020880m.g
Capsella rubella
Carubv10020880m.g
N
0.000
Cagra.0147s0016
Capsella grandiflora
Cagra.0147s0016
N
0.000
WHY2
Arabidopsis thaliana
AT1G71260
N
0.000
mgf015710m
Mimulus guttatus
mgf015710m
N
0.000
cassava24783.valid.m1
Manihot esculenta
cassava24783.valid.m1
N
0.000
Pm022821
Prunus mume
Pm022821
N
0.000
TCM_035992
Theobroma cacao
TCM_035992
N
0.000
ATWHY2
Arabidopsis lyrata
scaffold_202038.1
N
0.000
PRUPE_ppa011529mg
Prunus persica
PRUPE_ppa011529mg
N
0.000
PGSC0003DMG400022930
Solanum tuberosum
PGSC0003DMG400022930
N
0.000
MTR_7g116270
Medicago truncatula
MTR_7g116270
N
0.000
GLYMA19G43880
Glycine max
GLYMA19G43880
N
0.000
GLYMA03G41270
Glycine max
GLYMA03G41270
N
0.000