CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0001043901
(
Syphacia muris
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
SMUV_0001043901
T191087_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG14292
M01226_2.00
Caenorhabditis briggsae
VAWAACAW
WTGTTWTB
PBM
Lambert et al.(2019)
pTH11445
0.851
0.942
fkh-9
M00663_2.00
Caenorhabditis elegans
NNVWHAAYAN
NTRTTDWBNN
PBM
Narasimhan et al.(2015)
pTH9957
0.851
0.942
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0001043901-mRNA-1
Forkhead
69
162
RPSLSYKDLIIEAIETSPEKRLKLNEIYQVIRVLHPYYRLRPDQWGWQNSIRHNLSLHDCFVKLPMKQTSASGVVGHFWTVVPELGDKQTLRRR
Links
Other
Forkhead
family TFs
Other
Syphacia muris
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TELCIR_22450
Teladorsagia circumcincta
TELCIR_22450
N