Bo9g026020 (Brassica oleracea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bo9g026020 T191921_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.862 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.862 0.944
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.820 0.889
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.820 0.889
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g026020.1 GATA 89 124

Links

Other GATA family TFs
Other Brassica oleracea TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GATA20 Arabidopsis thaliana AT2G18380 D 0.862
GATA19 Arabidopsis thaliana AT4G36620 D 0.820
GATA20 Arabidopsis lyrata Al_scaffold_0003_3815 I 0.862
MNP Arabidopsis lyrata Al_scaffold_0005_1952 I 0.820
AMTR_s00011p00253850 Amborella trichopoda AMTR_s00011p00253850 I 0.807
GATA18 Arabidopsis thaliana AT3G50870 I 0.820
BGIOSGA001076 Oryza indica BGIOSGA001076 I 0.807
BGIOSGA017544 Oryza indica BGIOSGA017544 I 0.807
GATA15 Oryza indica BGIOSGA020424 I 0.807
Bo1g005530 Brassica oleracea Bo1g005530 I 0.820
Bo7g010220 Brassica oleracea Bo7g010220 I 0.831
Bo7g064860 Brassica oleracea Bo7g064860 I 0.820
Bo7g100580 Brassica oleracea Bo7g100580 I 0.820
Bo7g118030 Brassica oleracea Bo7g118030 I 0.820
Bo8g080330 Brassica oleracea Bo8g080330 I 0.820
Bra010563 Brassica rapa Bra010563 I 0.816
Bra011695 Brassica rapa Bra011695 I 0.820
Bra012080 Brassica rapa Bra012080 I 0.820
Bra012883 Brassica rapa Bra012883 I 0.820
Bra017766 Brassica rapa Bra017766 I 0.820
Bra036854 Brassica rapa Bra036854 I 0.820
Bra037221 Brassica rapa Bra037221 I 0.862
Bra039614 Brassica rapa Bra039614 I 0.862
BRADI2G14890 Brachypodium distachyon BRADI2G14890 I 0.825
BRADI2G45750 Brachypodium distachyon BRADI2G45750 I 0.807
F775_00859 Aegilops tauschii F775_00859 I 0.807
F775_42893 Aegilops tauschii F775_42893 I 0.820
GATA19 Arabidopsis lyrata fgenesh2_kg.7__409__AT4G36620.1 I 0.820
GLYMA02G06320 Glycine max GLYMA02G06320 I 0.819
GLYMA11G07350 Glycine max GLYMA11G07350 I 0.820
GLYMA11G25375 Glycine max GLYMA11G25375 I 0.820
GLYMA16G25370 Glycine max GLYMA16G25370 I 0.820
GRMZM2G123909 Zea mays GRMZM2G123909 I 0.807
GRMZM2G397616 Zea mays GRMZM2G397616 I 0.825
GSMUA_Achr3G31070_001 Musa acuminata GSMUA_Achr3G31070_001 I 0.807
GSMUA_Achr6G27250_001 Musa acuminata GSMUA_Achr6G27250_001 I 0.807
GSMUA_Achr7G25620_001 Musa acuminata GSMUA_Achr7G25620_001 I 0.807
LPERR01G21790 Leersia perrieri LPERR01G21790 I 0.807
LPERR05G21780 Leersia perrieri LPERR05G21780 I 0.807
LPERR05G22620 Leersia perrieri LPERR05G22620 I 0.807
MLOC_5372 Hordeum vulgare MLOC_5372 I 0.807
MLOC_62522 Hordeum vulgare MLOC_62522 I 0.820
MTR_5g020230 Medicago truncatula MTR_5g020230 I 0.820
MTR_8g077510 Medicago truncatula MTR_8g077510 I 0.833
OB01G34710 Oryza brachyantha OB01G34710 I 0.807
OB05G34480 Oryza brachyantha OB05G34480 I 0.807
OBART01G25510 Oryza barthii OBART01G25510 I 0.807
OBART05G26150 Oryza barthii OBART05G26150 I 0.802
OGLUM01G29320 Oryza glumaepatula OGLUM01G29320 I 0.807
OGLUM05G27770 Oryza glumaepatula OGLUM05G27770 I 0.802
OGLUM05G28510 Oryza glumaepatula OGLUM05G28510 I 0.807
OMERI01G23200 Oryza meridionalis OMERI01G23200 I 0.807
OMERI03G30220 Oryza meridionalis OMERI03G30220 I 0.807
OMERI05G23010 Oryza meridionalis OMERI05G23010 I 0.807
ONIVA01G28750 Oryza nivara ONIVA01G28750 I 0.807
ONIVA05G29020 Oryza nivara ONIVA05G29020 I 0.807
OPUNC01G25380 Oryza punctata OPUNC01G25380 I 0.807
OPUNC05G23750 Oryza punctata OPUNC05G23750 I 0.807
OPUNC05G24550 Oryza punctata OPUNC05G24550 I 0.807
ORGLA01G0208300 Oryza glaberrima ORGLA01G0208300 I 0.807
ORGLA05G0226400 Oryza glaberrima ORGLA05G0226400 I 0.807
ORGLA05G0233700 Oryza glaberrima ORGLA05G0233700 I 0.807
ORUFI01G28370 Oryza rufipogon ORUFI01G28370 I 0.807
ORUFI05G28050 Oryza rufipogon ORUFI05G28050 I 0.807
ORUFI05G28920 Oryza rufipogon ORUFI05G28920 I 0.807
OS01G0662800 Oryza sativa OS01G0662800 I 0.807
OS05G0567900 Oryza sativa OS05G0567900 I 0.807
GATA15 Oryza sativa OS05G0578900 I 0.807
PGSC0003DMG400003508 Solanum tuberosum PGSC0003DMG400003508 I 0.820
PGSC0003DMG400015502 Solanum tuberosum PGSC0003DMG400015502 I 0.820
POPTR_0005s12440 Populus trichocarpa POPTR_0005s12440 I 0.820
POPTR_0007s12930 Populus trichocarpa POPTR_0007s12930 I 0.820
PRUPE_ppa014930mg Prunus persica PRUPE_ppa014930mg I 0.820
Sb03g030310 Sorghum bicolor Sb03g030310 I 0.807
Sb09g028850 Sorghum bicolor Sb09g028850 I 0.807
Sb09g029510 Sorghum bicolor Sb09g029510 I 0.825
Si022366m.g Setaria italica Si022366m.g I 0.825
Si024214m.g Setaria italica Si024214m.g I 0.807
Solyc02g062760.2 Solanum lycopersicum Solyc02g062760.2 I 0.820
Solyc02g085190.1 Solanum lycopersicum Solyc02g085190.1 I 0.820
TCM_000376 Theobroma cacao TCM_000376 I 0.820
Traes_1AL_A1EA76E83 Triticum aestivum Traes_1AL_A1EA76E83 I 0.820
TRAES3BF091700010CFD_g Triticum aestivum TRAES3BF091700010CFD_g I 0.807
MNP Vitis vinifera VIT_04s0023g01840 I 0.820
Ca_02038 Cicer arietinum Ca_02038 I 0.820
Ca_16057 Cicer arietinum Ca_16057 I 0.807
Cla014435 Citrullus lanatus Cla014435 I 0.807
Cla014810 Citrullus lanatus Cla014810 I 0.820
Pm026628 Prunus mume Pm026628 I 0.820
29634.m002146 Ricinus communis 29634.m002146 I 0.820
cassava21185.m1 Manihot esculenta cassava21185.m1 I 0.820
cassava5664.m1 Manihot esculenta cassava5664.m1 I 0.820
Cucsa.106490 Cucumis sativus Cucsa.106490 I 0.820
Cucsa.127470 Cucumis sativus Cucsa.127470 I 0.807
mgf023982m Mimulus guttatus mgf023982m I 0.820
Aquca_007_00224 Aquilegia coerulea Aquca_007_00224 I 0.807
Aquca_010_00506 Aquilegia coerulea Aquca_010_00506 I 0.807
Bostr.18351s0307 Boechera stricta Bostr.18351s0307 I 0.862
Bostr.6864s0159 Boechera stricta Bostr.6864s0159 I 0.820
Bostr.7867s1518 Boechera stricta Bostr.7867s1518 I 0.820
Cagra.0926s0051 Capsella grandiflora Cagra.0926s0051 I 0.820
Carubv10007612m.g Capsella rubella Carubv10007612m.g I 0.820
Carubv10014541m.g Capsella rubella Carubv10014541m.g I 0.862
Carubv10017765m.g Capsella rubella Carubv10017765m.g I 0.820
Ciclev10026328m.g Citrus clementina Ciclev10026328m.g I 0.820
evm.TU.supercontig_6.118 Carica papaya evm.TU.supercontig_6.118 I 0.820
gene14763-v1.0-hybrid Fragaria vesca gene14763-v1.0-hybrid I 0.820
Gorai.003G014300 Gossypium raimondii Gorai.003G014300 I 0.820
Gorai.007G202900 Gossypium raimondii Gorai.007G202900 I 0.820
Gorai.008G067800 Gossypium raimondii Gorai.008G067800 I 0.820
Lus10028301.g Linum usitatissimum Lus10028301.g I 0.820
MDP0000253174 Malus domestica MDP0000253174 I 0.820
MDP0000310271 Malus domestica MDP0000310271 I 0.820
Pavir.Ca00998 Panicum virgatum Pavir.Ca00998 I 0.825
Pavir.Ea02338 Panicum virgatum Pavir.Ea02338 I 0.816
Pavir.Eb02678 Panicum virgatum Pavir.Eb02678 I 0.820
Pavir.J03293 Panicum virgatum Pavir.J03293 I 0.807
Pavir.J18346 Panicum virgatum Pavir.J18346 I 0.825
Pavir.J26908 Panicum virgatum Pavir.J26908 I 0.807
SapurV1A.0254s0200 Salix purpurea SapurV1A.0254s0200 I 0.820
SapurV1A.0978s0140 Salix purpurea SapurV1A.0978s0140 I 0.820
Thhalv10010986m.g Eutrema salsugineum Thhalv10010986m.g I 0.820
Thhalv10022854m.g Eutrema salsugineum Thhalv10022854m.g I 0.862
Thhalv10027520m.g Eutrema salsugineum Thhalv10027520m.g I 0.820
PK24471.1 Cannabis sativa PK24471.1 I 0.820
chr2.CM0249.1330.nc Lotus japonicus chr2.CM0249.1330.nc I 0.820
chr4.CM0283.270.nd Lotus japonicus chr4.CM0283.270.nd I 0.820