CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA07G37190
(
Glycine max
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
GLYMA07G37190
T193480_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA16
M06897_2.00
Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT
Dap-seq
OMalley et al.(2016)
GATA16_col_a
0.836
0.861
GATA15
M01997_2.00
Arabidopsis thaliana
NNHGATCNN
NNGATCDNN
PBM
Weirauch et al.(2014)
pTH7662
0.816
0.861
GATA15
M06886_2.00
Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
GATA15_col_b
0.816
0.861
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA07G37190.1
GATA
39
59
CADCGTTKTPLWRGGPAGPKV
GLYMA07G37190.1
GATA
85
102
FQSLCNACGIRSRKKKRA
GLYMA07G37190.2
GATA
39
74
CADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKKRA
Links
Other
GATA
family TFs
Other
Glycine max
TFs
143 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RBPJ
Homo sapiens
ENSG00000168214
D
0.000
M413DRAFT_22486
Hebeloma cylindrosporum
M413DRAFT_22486
N
0.000
fgenesh1_pg.C_scaffold_11000203
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_11000203
N
0.000
SERLA73DRAFT_174218
Serpula lacrymans
SERLA73DRAFT_174218
N
0.000
SCLCIDRAFT_110688
Scleroderma citrinum
SCLCIDRAFT_110688
N
0.000
SCHCODRAFT_13378
Schizophyllum commune
SCHCODRAFT_13378
N
0.000
PLEOSDRAFT_1054066
Pleurotus ostreatus
PLEOSDRAFT_1054066
N
0.000
PISMIDRAFT_646612
Pisolithus microcarpus
PISMIDRAFT_646612
N
0.000
PILCRDRAFT_827282
Piloderma croceum
PILCRDRAFT_827282
N
0.000
PHLGIDRAFT_17608
Phlebiopsis gigantea
PHLGIDRAFT_17608
N
0.000
PHACADRAFT_190379
Phanerochaete carnosa
PHACADRAFT_190379
N
0.000
PAXRUDRAFT_23347
Paxillus rubicundulus
PAXRUDRAFT_23347
N
0.000
MPER_06363
Moniliophthora perniciosa
MPER_06363
N
0.000
Moror_914
Moniliophthora roreri
Moror_914
N
0.000
AGABI2DRAFT_114358
Agaricus bisporus
AGABI2DRAFT_114358
N
0.000
M404DRAFT_134267
Pisolithus tinctorius
M404DRAFT_134267
N
0.000
M378DRAFT_115389
Amanita muscaria
M378DRAFT_115389
N
0.000
LACBIDRAFT_300968
Laccaria bicolor
LACBIDRAFT_300968
N
0.000
K443DRAFT_673333
Laccaria amethystina
K443DRAFT_673333
N
0.000
JAAARDRAFT_119629
Jaapia argillacea
JAAARDRAFT_119629
N
0.000
GLOTRDRAFT_52937
Gloeophyllum trabeum
GLOTRDRAFT_52937
N
0.000
GALMADRAFT_83961
Galerina marginata
GALMADRAFT_83961
N
0.000
FOMPIDRAFT_1141437
Fomitopsis pinicola
FOMPIDRAFT_1141437
N
0.000
CY34DRAFT_22011
Suillus luteus
CY34DRAFT_22011
N
0.000
CERSUDRAFT_110536
Ceriporiopsis subvermispora
CERSUDRAFT_110536
N
0.000
CC1G_13688
Coprinopsis cinerea
CC1G_13688
N
0.000