GSMUA_Achr3G31070_001 (Musa acuminata)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GSMUA_Achr3G31070_001 T193601_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.853 0.972
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.853 0.972
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.812 0.917
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.812 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P31070_001 GATA 101 136

Links

Other GATA family TFs
Other Musa acuminata TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDK_20s1381351g001 Phoenix dactylifera PDK_20s1381351g001 I 0.000
AMTR_s00049p00217400 Amborella trichopoda AMTR_s00049p00217400 I 0.000
POPTR_0007s01350 Populus trichocarpa POPTR_0007s01350 I 0.000
Sb06g020103 Sorghum bicolor Sb06g020103 I 0.000
Si017393m.g Setaria italica Si017393m.g I 0.000
Traes_6AL_C14335DC8 Triticum aestivum Traes_6AL_C14335DC8 I 0.000
Traes_6BL_B27806C89 Triticum aestivum Traes_6BL_B27806C89 I 0.000
GSMUA_Achr9G01880_001 Musa acuminata GSMUA_Achr9G01880_001 I 0.000
Traes_6DL_2F3586557 Triticum aestivum Traes_6DL_2F3586557 I 0.000
mgf018486m Mimulus guttatus mgf018486m I 0.000
F775_30638 Aegilops tauschii F775_30638 I 0.000
Pavir.Ab02181 Panicum virgatum Pavir.Ab02181 I 0.000
Pavir.Ga01597 Panicum virgatum Pavir.Ga01597 I 0.000
Pavir.Gb01338 Panicum virgatum Pavir.Gb01338 I 0.000
BRADI3G47627 Brachypodium distachyon BRADI3G47627 I 0.000
PK17141.1 Cannabis sativa PK17141.1 I 0.000
Traes_2DL_AE270CBAA Triticum aestivum Traes_2DL_AE270CBAA N 0.000
Traes_2DL_3757D78B3 Triticum aestivum Traes_2DL_3757D78B3 N 0.000
Si012740m.g Setaria italica Si012740m.g N 0.000
Sb04g024780 Sorghum bicolor Sb04g024780 N 0.000
OS02G0594800 Oryza sativa OS02G0594800 N 0.000
ORUFI04G17470 Oryza rufipogon ORUFI04G17470 N 0.000
ONIVA04G14230 Oryza nivara ONIVA04G14230 N 0.000
ORUFI02G23890 Oryza rufipogon ORUFI02G23890 N 0.000
ORGLA02G0193300 Oryza glaberrima ORGLA02G0193300 N 0.000
OBART02G22660 Oryza barthii OBART02G22660 N 0.000
BGIOSGA006133 Oryza indica BGIOSGA006133 N 0.000
BGIOSGA014881 Oryza indica BGIOSGA014881 N 0.000
BRADI5G13450 Brachypodium distachyon BRADI5G13450 N 0.000
F775_00415 Aegilops tauschii F775_00415 N 0.000
F775_14938 Aegilops tauschii F775_14938 N 0.000
GRMZM2G038073 Zea mays GRMZM2G038073 N 0.000
GRMZM2G104078 Zea mays GRMZM2G104078 N 0.000
LPERR02G18380 Leersia perrieri LPERR02G18380 N 0.000
OB02G30060 Oryza brachyantha OB02G30060 N 0.000
OPUNC04G13980 Oryza punctata OPUNC04G13980 N 0.000
OBART04G16110 Oryza barthii OBART04G16110 N 0.000
OGLUM02G22980 Oryza glumaepatula OGLUM02G22980 N 0.000
OGLUM04G16020 Oryza glumaepatula OGLUM04G16020 N 0.000
OLONG_005904 Oryza longistaminata OLONG_005904 N 0.000
OLONG_021848 Oryza longistaminata OLONG_021848 N 0.000
OMERI01G02010 Oryza meridionalis OMERI01G02010 N 0.000
OMERI02G22200 Oryza meridionalis OMERI02G22200 N 0.000
ONIVA02G25300 Oryza nivara ONIVA02G25300 N 0.000
OPUNC02G20570 Oryza punctata OPUNC02G20570 N 0.000