Pavir.Gb01338 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Gb01338 T298871_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.894 0.561
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.892 0.561
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Gb01338.1.p NAC/NAM 58 202

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ga01597 Panicum virgatum Pavir.Ga01597 I 0.989
Si012740m.g Setaria italica Si012740m.g N 0.983
Sb06g020103 Sorghum bicolor Sb06g020103 I 0.975
Si017393m.g Setaria italica Si017393m.g I 0.967
Si010735m.g Setaria italica Si010735m.g I 0.966
GRMZM2G450445 Zea mays GRMZM2G450445 N 0.959
BRADI3G47627 Brachypodium distachyon BRADI3G47627 I 0.957
PDK_20s1381351g001 Phoenix dactylifera PDK_20s1381351g001 I 0.956
F775_30638 Aegilops tauschii F775_30638 I 0.952
Traes_6BL_B27806C89 Triticum aestivum Traes_6BL_B27806C89 I 0.952
Traes_6DL_2F3586557 Triticum aestivum Traes_6DL_2F3586557 I 0.952
29917.m002016 Ricinus communis 29917.m002016 I 0.951
OPUNC04G13980 Oryza punctata OPUNC04G13980 N 0.948
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I 0.947
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I 0.947
TCM_016984 Theobroma cacao TCM_016984 I 0.943
Pavir.Aa01341 Panicum virgatum Pavir.Aa01341 I 0.941
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I 0.941
Si006639m.g Setaria italica Si006639m.g I 0.938
OBART06G10240 Oryza barthii OBART06G10240 I 0.936
OGLUM06G11140 Oryza glumaepatula OGLUM06G11140 I 0.936
OLONG_017685 Oryza longistaminata OLONG_017685 I 0.936
OMERI06G11940 Oryza meridionalis OMERI06G11940 I 0.936
ONIVA06G11950 Oryza nivara ONIVA06G11950 I 0.936
ORGLA06G0096700 Oryza glaberrima ORGLA06G0096700 I 0.936
ORUFI06G10770 Oryza rufipogon ORUFI06G10770 I 0.936
BGIOSGA022664 Oryza indica BGIOSGA022664 I 0.935
BRADI1G43840 Brachypodium distachyon BRADI1G43840 I 0.935
OLONG_021848 Oryza longistaminata OLONG_021848 N 0.935
F775_14938 Aegilops tauschii F775_14938 N 0.933
Traes_6AL_C14335DC8 Triticum aestivum Traes_6AL_C14335DC8 I 0.932
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I 0.931
Traes_7BS_99BF8BA2F Triticum aestivum Traes_7BS_99BF8BA2F I 0.931
cassava14633.m1 Manihot esculenta cassava14633.m1 I 0.931
GSMUA_AchrUn_randomG17050_001 Musa acuminata GSMUA_AchrUn_randomG17050_001 I 0.930
OB06G19430 Oryza brachyantha OB06G19430 I 0.930
Traes_7DS_78B5508C0 Triticum aestivum Traes_7DS_78B5508C0 I 0.930
BGIOSGA006133 Oryza indica BGIOSGA006133 N 0.929
LPERR02G18380 Leersia perrieri LPERR02G18380 N 0.929
OBART02G22660 Oryza barthii OBART02G22660 N 0.929
OGLUM02G22980 Oryza glumaepatula OGLUM02G22980 N 0.929
OMERI02G22200 Oryza meridionalis OMERI02G22200 N 0.929
ONIVA02G25300 Oryza nivara ONIVA02G25300 N 0.929
OPUNC02G20570 Oryza punctata OPUNC02G20570 N 0.929
ORGLA02G0193300 Oryza glaberrima ORGLA02G0193300 N 0.929
ORUFI02G23890 Oryza rufipogon ORUFI02G23890 N 0.929
OS02G0594800 Oryza sativa OS02G0594800 N 0.929
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I 0.929
OPUNC06G09830 Oryza punctata OPUNC06G09830 I 0.928
OB02G30060 Oryza brachyantha OB02G30060 N 0.927
PK17141.1 Cannabis sativa PK17141.1 I 0.927
GSMUA_Achr9G01880_001 Musa acuminata GSMUA_Achr9G01880_001 I 0.924
POPTR_0007s01350 Populus trichocarpa POPTR_0007s01350 I 0.923
Traes_7AS_6E6A5CD04 Triticum aestivum Traes_7AS_6E6A5CD04 I 0.923
TRIUR3_21992 Triticum urartu TRIUR3_21992 I 0.923
mgf018486m Mimulus guttatus mgf018486m I 0.923
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I 0.923
mgf012882m Mimulus guttatus mgf012882m I 0.921
F775_00415 Aegilops tauschii F775_00415 N 0.920
GLYMA20G32690 Glycine max GLYMA20G32690 I 0.920
GRMZM2G038073 Zea mays GRMZM2G038073 N 0.920
GRMZM2G104078 Zea mays GRMZM2G104078 N 0.920
Traes_2DL_3757D78B3 Triticum aestivum Traes_2DL_3757D78B3 N 0.920
Traes_2DL_AE270CBAA1 Triticum aestivum Traes_2DL_AE270CBAA1 N 0.920
Traes_2DL_AE270CBAA Triticum aestivum Traes_2DL_AE270CBAA N 0.920
Pm015625 Prunus mume Pm015625 I 0.919
AMTR_s00049p00217400 Amborella trichopoda AMTR_s00049p00217400 I 0.918
F775_16052 Aegilops tauschii F775_16052 I 0.918
Sb04g024780 Sorghum bicolor Sb04g024780 N 0.917
OMERI01G23720 Oryza meridionalis OMERI01G23720 I 0.916
Pavir.Ab02181 Panicum virgatum Pavir.Ab02181 I 0.916
BRADI2G05700 Brachypodium distachyon BRADI2G05700 I 0.915
MLOC_75795 Hordeum vulgare MLOC_75795 I 0.915
PRUPE_ppa005648mg Prunus persica PRUPE_ppa005648mg I 0.915
Aquca_054_00006 Aquilegia coerulea Aquca_054_00006 I 0.914
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I 0.913
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I 0.913
Sb10g009670 Sorghum bicolor Sb10g009670 I 0.913
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I 0.913
GLYMA19G00640 Glycine max GLYMA19G00640 N 0.910
GRMZM2G027309 Zea mays GRMZM2G027309 I 0.910
GRMZM2G078954 Zea mays GRMZM2G078954 I 0.910
GRMZM2G086768 Zea mays GRMZM2G086768 I 0.910
GRMZM2G379608 Zea mays GRMZM2G379608 I 0.910
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I 0.909
GSMUA_Achr4G02730_001 Musa acuminata GSMUA_Achr4G02730_001 I 0.909
Pm029010 Prunus mume Pm029010 I 0.909
F775_07518 Aegilops tauschii F775_07518 I 0.908
AMTR_s00021p00209320 Amborella trichopoda AMTR_s00021p00209320 I 0.907
GLYMA02G11140 Glycine max GLYMA02G11140 I 0.906
Si019444m.g Setaria italica Si019444m.g I 0.906
Pavir.Aa00442 Panicum virgatum Pavir.Aa00442 I 0.906
SOG1 Arabidopsis thaliana AT1G25580 I 0.904
BRADI5G13450 Brachypodium distachyon BRADI5G13450 N 0.904
GLYMA19G08510 Glycine max GLYMA19G08510 N 0.904
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I 0.904
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I 0.904
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I 0.904
Bostr.12659s0396 Boechera stricta Bostr.12659s0396 I 0.904
evm.TU.supercontig_83.99 Carica papaya evm.TU.supercontig_83.99 I 0.904
GLYMA01G22510 Glycine max GLYMA01G22510 I 0.902
Sb03g030750 Sorghum bicolor Sb03g030750 I 0.902
Si002301m.g Setaria italica Si002301m.g I 0.902
Solyc02g093420.2 Solanum lycopersicum Solyc02g093420.2 I 0.902
TRIUR3_27393 Triticum urartu TRIUR3_27393 I 0.902
Pavir.J05241 Panicum virgatum Pavir.J05241 I 0.902
BGIOSGA014881 Oryza indica BGIOSGA014881 N 0.901
OBART04G16110 Oryza barthii OBART04G16110 N 0.901
OGLUM04G16020 Oryza glumaepatula OGLUM04G16020 N 0.901
OLONG_005904 Oryza longistaminata OLONG_005904 N 0.901
OMERI01G02010 Oryza meridionalis OMERI01G02010 N 0.901
ONIVA04G14230 Oryza nivara ONIVA04G14230 N 0.901
ORGLA01G0213300 Oryza glaberrima ORGLA01G0213300 I 0.901
ORUFI04G17470 Oryza rufipogon ORUFI04G17470 N 0.901
TCM_011869 Theobroma cacao TCM_011869 I 0.901
cassava3690.m1 Manihot esculenta cassava3690.m1 I 0.901
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I 0.901
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I 0.901
SOG1 Arabidopsis lyrata scaffold_102939.1 I 0.900
SOG1 Vitis vinifera VIT_01s0011g02990 I 0.900
ANAC073 Vitis vinifera VIT_12s0028g03050 I 0.900
Cagra.11546s0003 Capsella grandiflora Cagra.11546s0003 I 0.900
Carubv10009087m.g Capsella rubella Carubv10009087m.g I 0.900
Eucgr.G02349 Eucalyptus grandis Eucgr.G02349 I 0.900
Pavir.Db01100 Panicum virgatum Pavir.Db01100 I 0.900
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I 0.900
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I 0.900
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I 0.899
TCM_008229 Theobroma cacao TCM_008229 I 0.899
29983.m003125 Ricinus communis 29983.m003125 I 0.899
Gorai.008G155200 Gossypium raimondii Gorai.008G155200 I 0.899
Bo1g016630 Brassica oleracea Bo1g016630 I 0.898
Bra011090 Brassica rapa Bra011090 I 0.898
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I 0.898
Bo7g113660 Brassica oleracea Bo7g113660 I 0.897
Bra024152 Brassica rapa Bra024152 I 0.897
OLONG_014922 Oryza longistaminata OLONG_014922 I 0.897
BGIOSGA002220 Oryza indica BGIOSGA002220 I 0.896
F775_07141 Aegilops tauschii F775_07141 I 0.896
GLYMA16G07501 Glycine max GLYMA16G07501 N 0.896
LPERR01G05530 Leersia perrieri LPERR01G05530 I 0.896
OB01G15780 Oryza brachyantha OB01G15780 I 0.896
OBART01G05840 Oryza barthii OBART01G05840 I 0.896
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I 0.896
OLONG_008708 Oryza longistaminata OLONG_008708 I 0.896
ONIVA01G06690 Oryza nivara ONIVA01G06690 I 0.896
OPUNC01G05680 Oryza punctata OPUNC01G05680 I 0.896
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I 0.896
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I 0.896
OS01G0191300 Oryza sativa OS01G0191300 I 0.896
PGSC0003DMG400012607 Solanum tuberosum PGSC0003DMG400012607 I 0.896
TRIUR3_31341 Triticum urartu TRIUR3_31341 I 0.896
MDP0000124509 Malus domestica MDP0000124509 I 0.896
BGIOSGA001044 Oryza indica BGIOSGA001044 I 0.895
OPUNC01G25960 Oryza punctata OPUNC01G25960 I 0.895
ORUFI01G29010 Oryza rufipogon ORUFI01G29010 I 0.895
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I 0.895
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I 0.895
anac075 Arabidopsis thaliana AT4G29230 D 0.894
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I 0.894
GLYMA01G00880 Glycine max GLYMA01G00880 I 0.894
GLYMA08G03590 Glycine max GLYMA08G03590 I 0.894
GSMUA_Achr2G09080_001 Musa acuminata GSMUA_Achr2G09080_001 I 0.894
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I 0.894
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I 0.894
TCM_037747 Theobroma cacao TCM_037747 I 0.894
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I 0.894
29912.m005354 Ricinus communis 29912.m005354 I 0.894
cassava11584.m1 Manihot esculenta cassava11584.m1 I 0.894
cassava44586.m1 Manihot esculenta cassava44586.m1 I 0.894
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I 0.894
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I 0.894
Carubv10004602m.g Capsella rubella Carubv10004602m.g I 0.894
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I 0.894
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I 0.894
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I 0.894
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I 0.894
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I 0.894
Thhalv10007551m.g Eutrema salsugineum Thhalv10007551m.g I 0.894
Bra024733 Brassica rapa Bra024733 I 0.893
GLYMA05G36031 Glycine max GLYMA05G36031 I 0.893
GSMUA_Achr6G27000_001 Musa acuminata GSMUA_Achr6G27000_001 I 0.893
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I 0.893
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I 0.893
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I 0.893
Cla011431 Citrullus lanatus Cla011431 I 0.893
Pm027280 Prunus mume Pm027280 I 0.893
Cucsa.288680 Cucumis sativus Cucsa.288680 I 0.893
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I 0.893
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I 0.893
SapurV1A.1828s0030 Salix purpurea SapurV1A.1828s0030 I 0.893
SapurV1A.2554s0030 Salix purpurea SapurV1A.2554s0030 I 0.893
SapurV1A.3101s0030 Salix purpurea SapurV1A.3101s0030 I 0.893
PK27085.1 Cannabis sativa PK27085.1 D 0.892
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I 0.891
LPERR01G22300 Leersia perrieri LPERR01G22300 I 0.891
POPTR_0017s04800 Populus trichocarpa POPTR_0017s04800 I 0.891
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I 0.891
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.890
LPERR05G05170 Leersia perrieri LPERR05G05170 I 0.889
cassava46566.m1 Manihot esculenta cassava46566.m1 I 0.889
PK28347.1 Cannabis sativa PK28347.1 I 0.889
Bo5g043100 Brassica oleracea Bo5g043100 I 0.888
OGLUM01G29870 Oryza glumaepatula OGLUM01G29870 I 0.888
ONIVA01G29490 Oryza nivara ONIVA01G29490 I 0.888
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I 0.888
MDP0000165845 Malus domestica MDP0000165845 I 0.888
MDP0000216205 Malus domestica MDP0000216205 I 0.888
GRMZM2G166721 Zea mays GRMZM2G166721 I 0.887
Sb03g003170 Sorghum bicolor Sb03g003170 I 0.887
Si001527m.g Setaria italica Si001527m.g I 0.887
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I 0.887
Pavir.J13205 Panicum virgatum Pavir.J13205 I 0.887
GRMZM2G112681 Zea mays GRMZM2G112681 I 0.886
GSMUA_Achr4G30940_001 Musa acuminata GSMUA_Achr4G30940_001 I 0.886
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I 0.886
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I 0.886
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I 0.886
GLYMA05G09110 Glycine max GLYMA05G09110 I 0.885
Ca_23230 Cicer arietinum Ca_23230 N 0.884
cassava17166.m1 Manihot esculenta cassava17166.m1 I 0.883
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I 0.883
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I 0.883
PK25812.1 Cannabis sativa PK25812.1 I 0.881
Solyc05g009840.2 Solanum lycopersicum Solyc05g009840.2 I 0.880
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I 0.880
Eucgr.E03226 Eucalyptus grandis Eucgr.E03226 I 0.877
LPERR04G12800 Leersia perrieri LPERR04G12800 N 0.876
Cla020673 Citrullus lanatus Cla020673 I 0.876
29738.m001046 Ricinus communis 29738.m001046 I 0.876
Cucsa.283900 Cucumis sativus Cucsa.283900 I 0.876
GLYMA07G15180 Glycine max GLYMA07G15180 I 0.874
Pavir.Eb02718 Panicum virgatum Pavir.Eb02718 I 0.872
Si022710m.g Setaria italica Si022710m.g I 0.871
Aquca_002_01098 Aquilegia coerulea Aquca_002_01098 I 0.871
Pavir.Ca00926 Panicum virgatum Pavir.Ca00926 I 0.871
Pavir.J04559 Panicum virgatum Pavir.J04559 I 0.871