CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc02g093420.2
(
Solanum lycopersicum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Solyc02g093420.2
T295830_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
anac075
M07223_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
ANAC075_col_a
0.888
0.614
PK27085.1
M01293_2.00
Cannabis sativa
AATTTATT
AATAAATT
PBM
Lambert et al.(2019)
pTH11262
0.886
0.614
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc02g093420.2.1
NAC/NAM
56
197
PVGVKFDPSDAELVEHLEAKCGVGNSEQHKFIDEFIPTLEVHEGICYTHPENLPGSKKDGSSIHFFYRITNAYATGKRKRRKIHDENNLMKEHVRWHKTGKTKVVMENGFQKGCKKVMVLYQTLKKGSKQEKTNWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Solanum lycopersicum
TFs
159 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400012607
Solanum tuberosum
PGSC0003DMG400012607
I
0.993
mgf018486m
Mimulus guttatus
mgf018486m
I
0.970
TCM_016984
Theobroma cacao
TCM_016984
I
0.969
POPTR_0001s35490
Populus trichocarpa
POPTR_0001s35490
I
0.967
SapurV1A.0716s0010
Salix purpurea
SapurV1A.0716s0010
I
0.967
SapurV1A.1388s0020
Salix purpurea
SapurV1A.1388s0020
I
0.967
cassava3690.m1
Manihot esculenta
cassava3690.m1
I
0.963
Ciclev10015507m.g
Citrus clementina
Ciclev10015507m.g
I
0.963
GLYMA19G08510
Glycine max
GLYMA19G08510
N
0.962
PK17141.1
Cannabis sativa
PK17141.1
I
0.961
VIT_14s0066g00360
Vitis vinifera
VIT_14s0066g00360
I
0.959
GSMUA_AchrUn_randomG17050_001
Musa acuminata
GSMUA_AchrUn_randomG17050_001
I
0.958
Lus10003668.g
Linum usitatissimum
Lus10003668.g
N
0.958
GLYMA16G07501
Glycine max
GLYMA16G07501
N
0.957
Pm015625
Prunus mume
Pm015625
I
0.957
chr1.CM0001.370.nd
Lotus japonicus
chr1.CM0001.370.nd
N
0.957
PRUPE_ppa006948mg
Prunus persica
PRUPE_ppa006948mg
I
0.954
Ca_23230
Cicer arietinum
Ca_23230
N
0.951
Aquca_054_00006
Aquilegia coerulea
Aquca_054_00006
I
0.951
Gorai.006G034600
Gossypium raimondii
Gorai.006G034600
I
0.950
29917.m002016
Ricinus communis
29917.m002016
I
0.949
PDK_20s1381351g001
Phoenix dactylifera
PDK_20s1381351g001
I
0.949
cassava14633.m1
Manihot esculenta
cassava14633.m1
I
0.948
MDP0000663564
Malus domestica
MDP0000663564
I
0.948
GLYMA19G00640
Glycine max
GLYMA19G00640
N
0.947
GLYMA05G09110
Glycine max
GLYMA05G09110
I
0.941
Eucgr.J02254
Eucalyptus grandis
Eucgr.J02254
I
0.941
BRADI3G47627
Brachypodium distachyon
BRADI3G47627
I
0.936
MDP0000283975
Malus domestica
MDP0000283975
N
0.934
MTR_7g033320
Medicago truncatula
MTR_7g033320
I
0.931
Cla004701
Citrullus lanatus
Cla004701
I
0.931
GSMUA_Achr9G01880_001
Musa acuminata
GSMUA_Achr9G01880_001
I
0.930
OLONG_021848
Oryza longistaminata
OLONG_021848
N
0.930
F775_30638
Aegilops tauschii
F775_30638
I
0.929
Traes_6AL_C14335DC8
Triticum aestivum
Traes_6AL_C14335DC8
I
0.929
Traes_6BL_B27806C89
Triticum aestivum
Traes_6BL_B27806C89
I
0.929
Traes_6DL_2F3586557
Triticum aestivum
Traes_6DL_2F3586557
I
0.929
OB02G30060
Oryza brachyantha
OB02G30060
N
0.927
gene27940-v1.0-hybrid
Fragaria vesca
gene27940-v1.0-hybrid
I
0.927
BGIOSGA006133
Oryza indica
BGIOSGA006133
N
0.926
OBART02G22660
Oryza barthii
OBART02G22660
N
0.926
OGLUM02G22980
Oryza glumaepatula
OGLUM02G22980
N
0.926
OMERI02G22200
Oryza meridionalis
OMERI02G22200
N
0.926
ONIVA02G25300
Oryza nivara
ONIVA02G25300
N
0.926
OPUNC02G20570
Oryza punctata
OPUNC02G20570
N
0.926
ORGLA02G0193300
Oryza glaberrima
ORGLA02G0193300
N
0.926
ORUFI02G23890
Oryza rufipogon
ORUFI02G23890
N
0.926
OS02G0594800
Oryza sativa
OS02G0594800
N
0.926
Gorai.007G075300
Gossypium raimondii
Gorai.007G075300
I
0.926
Cucsa.011210
Cucumis sativus
Cucsa.011210
I
0.925
GLYMA20G32690
Glycine max
GLYMA20G32690
I
0.923
Pavir.Aa01341
Panicum virgatum
Pavir.Aa01341
I
0.913
Pavir.Ab02181
Panicum virgatum
Pavir.Ab02181
I
0.910
Si017393m.g
Setaria italica
Si017393m.g
I
0.908
BRADI2G33307
Brachypodium distachyon
BRADI2G33307
I
0.907
GSMUA_Achr2G16590_001
Musa acuminata
GSMUA_Achr2G16590_001
I
0.906
Si012740m.g
Setaria italica
Si012740m.g
N
0.904
GLYMA01G22510
Glycine max
GLYMA01G22510
I
0.903
GSMUA_Achr3G07330_001
Musa acuminata
GSMUA_Achr3G07330_001
I
0.902
Pavir.Gb01338
Panicum virgatum
Pavir.Gb01338
I
0.902
GLYMA02G11140
Glycine max
GLYMA02G11140
I
0.901
POPTR_0008s11550
Populus trichocarpa
POPTR_0008s11550
I
0.900
OLONG_021085
Oryza longistaminata
OLONG_021085
I
0.898
ORUFI05G06530
Oryza rufipogon
ORUFI05G06530
I
0.898
AMTR_s00049p00217400
Amborella trichopoda
AMTR_s00049p00217400
I
0.897
SOG1
Vitis vinifera
VIT_01s0011g02990
I
0.897
Sb06g020103
Sorghum bicolor
Sb06g020103
I
0.895
SapurV1A.0079s0500
Salix purpurea
SapurV1A.0079s0500
I
0.895
GSMUA_Achr7G09510_001
Musa acuminata
GSMUA_Achr7G09510_001
I
0.894
Lus10021708.g
Linum usitatissimum
Lus10021708.g
I
0.894
Thhalv10024980m.g
Eutrema salsugineum
Thhalv10024980m.g
I
0.893
chr2.CM0749.410.nc
Lotus japonicus
chr2.CM0749.410.nc
I
0.893
Bo1g016630
Brassica oleracea
Bo1g016630
I
0.892
Bra011090
Brassica rapa
Bra011090
I
0.892
GSMUA_AchrUn_randomG28610_001
Musa acuminata
GSMUA_AchrUn_randomG28610_001
I
0.891
SapurV1A.0304s0050
Salix purpurea
SapurV1A.0304s0050
I
0.891
SapurV1A.2846s0020
Salix purpurea
SapurV1A.2846s0020
I
0.891
LPERR02G18380
Leersia perrieri
LPERR02G18380
N
0.890
MDP0000124509
Malus domestica
MDP0000124509
I
0.890
GLYMA01G00880
Glycine max
GLYMA01G00880
I
0.889
GLYMA08G03590
Glycine max
GLYMA08G03590
I
0.889
MTR_5g053430
Medicago truncatula
MTR_5g053430
I
0.889
OPUNC04G13980
Oryza punctata
OPUNC04G13980
N
0.889
TCM_037747
Theobroma cacao
TCM_037747
I
0.889
VIT_11s0016g02880
Vitis vinifera
VIT_11s0016g02880
I
0.889
29912.m005354
Ricinus communis
29912.m005354
I
0.889
cassava11584.m1
Manihot esculenta
cassava11584.m1
I
0.889
cassava44586.m1
Manihot esculenta
cassava44586.m1
I
0.889
Eucgr.C00958
Eucalyptus grandis
Eucgr.C00958
I
0.889
evm.TU.supercontig_78.40
Carica papaya
evm.TU.supercontig_78.40
I
0.889
gene11344-v1.0-hybrid
Fragaria vesca
gene11344-v1.0-hybrid
I
0.889
Gorai.009G028900
Gossypium raimondii
Gorai.009G028900
I
0.889
Pavir.Da01643
Panicum virgatum
Pavir.Da01643
I
0.889
PK25812.1
Cannabis sativa
PK25812.1
I
0.889
anac075
Arabidopsis thaliana
AT4G29230
D
0.888
BGIOSGA002220
Oryza indica
BGIOSGA002220
I
0.888
anac075
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7001013
I
0.888
LPERR01G05530
Leersia perrieri
LPERR01G05530
I
0.888
OB01G15780
Oryza brachyantha
OB01G15780
I
0.888
OBART01G05840
Oryza barthii
OBART01G05840
I
0.888
OGLUM01G06390
Oryza glumaepatula
OGLUM01G06390
I
0.888
OLONG_008708
Oryza longistaminata
OLONG_008708
I
0.888
ONIVA01G06690
Oryza nivara
ONIVA01G06690
I
0.888
OPUNC01G05680
Oryza punctata
OPUNC01G05680
I
0.888
ORGLA01G0055000
Oryza glaberrima
ORGLA01G0055000
I
0.888
ORUFI01G06380
Oryza rufipogon
ORUFI01G06380
I
0.888
OS01G0191300
Oryza sativa
OS01G0191300
I
0.888
POPTR_0006s15740
Populus trichocarpa
POPTR_0006s15740
I
0.888
POPTR_0010s13980
Populus trichocarpa
POPTR_0010s13980
I
0.888
POPTR_0018s06790
Populus trichocarpa
POPTR_0018s06790
I
0.888
Bostr.7867s0767
Boechera stricta
Bostr.7867s0767
I
0.888
Cagra.0495s0057
Capsella grandiflora
Cagra.0495s0057
I
0.888
Carubv10004602m.g
Capsella rubella
Carubv10004602m.g
I
0.888
SapurV1A.0212s0190
Salix purpurea
SapurV1A.0212s0190
I
0.888
BGIOSGA018654
Oryza indica
BGIOSGA018654
I
0.887
GLYMA05G36031
Glycine max
GLYMA05G36031
I
0.887
OBART05G06140
Oryza barthii
OBART05G06140
I
0.887
ONIVA05G06750
Oryza nivara
ONIVA05G06750
I
0.887
ORGLA05G0055000
Oryza glaberrima
ORGLA05G0055000
I
0.887
OS05G0194500
Oryza sativa
OS05G0194500
I
0.887
PGSC0003DMG400016896
Solanum tuberosum
PGSC0003DMG400016896
I
0.887
PRUPE_ppa004775mg
Prunus persica
PRUPE_ppa004775mg
I
0.887
Solyc05g026180.1
Solanum lycopersicum
Solyc05g026180.1
I
0.887
Cla011431
Citrullus lanatus
Cla011431
I
0.887
Pm027280
Prunus mume
Pm027280
I
0.887
Cucsa.288680
Cucumis sativus
Cucsa.288680
I
0.887
SapurV1A.1259s0030
Salix purpurea
SapurV1A.1259s0030
I
0.887
GRMZM2G038073
Zea mays
GRMZM2G038073
N
0.886
GRMZM2G104078
Zea mays
GRMZM2G104078
N
0.886
OGLUM05G06420
Oryza glumaepatula
OGLUM05G06420
I
0.886
PK27085.1
Cannabis sativa
PK27085.1
D
0.886
OB05G15600
Oryza brachyantha
OB05G15600
I
0.884
Traes_7BS_99BF8BA2F
Triticum aestivum
Traes_7BS_99BF8BA2F
I
0.884
Traes_7DS_78B5508C0
Triticum aestivum
Traes_7DS_78B5508C0
I
0.883
Pavir.Ga01597
Panicum virgatum
Pavir.Ga01597
I
0.883
29738.m001046
Ricinus communis
29738.m001046
I
0.881
cassava12330.valid.m1
Manihot esculenta
cassava12330.valid.m1
I
0.880
LPERR05G05170
Leersia perrieri
LPERR05G05170
I
0.879
Bo7g113660
Brassica oleracea
Bo7g113660
I
0.878
Bra024152
Brassica rapa
Bra024152
I
0.878
GRMZM2G166721
Zea mays
GRMZM2G166721
I
0.878
Sb03g003170
Sorghum bicolor
Sb03g003170
I
0.878
Pavir.Eb00261
Panicum virgatum
Pavir.Eb00261
I
0.878
Pavir.J13205
Panicum virgatum
Pavir.J13205
I
0.878
GRMZM2G112681
Zea mays
GRMZM2G112681
I
0.877
GSMUA_Achr6G05480_001
Musa acuminata
GSMUA_Achr6G05480_001
I
0.877
Cla020673
Citrullus lanatus
Cla020673
I
0.877
Cucsa.283900
Cucumis sativus
Cucsa.283900
I
0.877
F775_14938
Aegilops tauschii
F775_14938
N
0.875
PGSC0003DMG400000809
Solanum tuberosum
PGSC0003DMG400000809
I
0.875
Sb04g024780
Sorghum bicolor
Sb04g024780
N
0.875
TCM_011869
Theobroma cacao
TCM_011869
I
0.875
Sb10g009670
Sorghum bicolor
Sb10g009670
I
0.874
Si001527m.g
Setaria italica
Si001527m.g
I
0.874
Gorai.008G186300
Gossypium raimondii
Gorai.008G186300
I
0.874
gene03875-v1.0-hybrid
Fragaria vesca
gene03875-v1.0-hybrid
I
0.873
Traes_7AS_6E6A5CD04
Triticum aestivum
Traes_7AS_6E6A5CD04
I
0.872
TRIUR3_21992
Triticum urartu
TRIUR3_21992
I
0.872
Gorai.010G078900
Gossypium raimondii
Gorai.010G078900
I
0.872