CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si010735m.g
(
Setaria italica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Si010735m.g
T295706_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
anac075
M07223_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
ANAC075_col_a
0.915
0.596
PK27085.1
M01293_2.00
Cannabis sativa
AATTTATT
AATAAATT
PBM
Lambert et al.(2019)
pTH11262
0.913
0.596
NAC010
M07167_2.00
Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN
Dap-seq
OMalley et al.(2016)
SND3_colamp_a
0.881
0.570
NAC010
M07168_2.00
Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG
Dap-seq
OMalley et al.(2016)
SND3_col_b
0.881
0.570
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si010735m
NAC/NAM
58
202
PAGVKFDPSDFELLQHLEGKSSLLNSKSHALIDAFIPTIEEKGGICYTHPKNFPGIKMDGSTFHFFHRVPNAYGCGHRKRRKVSGDVGSVCDEPIRWHKTGKPKPIRDDNGVKKGWKEILVLYRGSKRGGSNTHIDNWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Setaria italica
TFs
192 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Gb01338
Panicum virgatum
Pavir.Gb01338
I
0.966
Pavir.Ga01597
Panicum virgatum
Pavir.Ga01597
I
0.954
GRMZM2G450445
Zea mays
GRMZM2G450445
N
0.952
Si012740m.g
Setaria italica
Si012740m.g
N
0.949
Sb06g020103
Sorghum bicolor
Sb06g020103
I
0.940
Sb10g009670
Sorghum bicolor
Sb10g009670
I
0.934
AMTR_s00049p00217400
Amborella trichopoda
AMTR_s00049p00217400
I
0.933
F775_16052
Aegilops tauschii
F775_16052
I
0.933
OMERI01G23720
Oryza meridionalis
OMERI01G23720
I
0.931
GRMZM2G027309
Zea mays
GRMZM2G027309
I
0.930
GRMZM2G078954
Zea mays
GRMZM2G078954
I
0.930
GRMZM2G086768
Zea mays
GRMZM2G086768
I
0.930
GRMZM2G379608
Zea mays
GRMZM2G379608
I
0.930
BRADI2G05700
Brachypodium distachyon
BRADI2G05700
I
0.928
MLOC_75795
Hordeum vulgare
MLOC_75795
I
0.928
GSMUA_Achr4G02730_001
Musa acuminata
GSMUA_Achr4G02730_001
I
0.926
Pm015625
Prunus mume
Pm015625
I
0.926
TRAES3BF097400030CFD_g
Triticum aestivum
TRAES3BF097400030CFD_g
I
0.925
Sb03g030750
Sorghum bicolor
Sb03g030750
I
0.921
Si002301m.g
Setaria italica
Si002301m.g
I
0.921
TRIUR3_27393
Triticum urartu
TRIUR3_27393
I
0.921
29917.m002016
Ricinus communis
29917.m002016
I
0.921
Pavir.J05241
Panicum virgatum
Pavir.J05241
I
0.921
OBART06G10240
Oryza barthii
OBART06G10240
I
0.920
OGLUM06G11140
Oryza glumaepatula
OGLUM06G11140
I
0.920
OLONG_017685
Oryza longistaminata
OLONG_017685
I
0.920
OMERI06G11940
Oryza meridionalis
OMERI06G11940
I
0.920
ONIVA06G11950
Oryza nivara
ONIVA06G11950
I
0.920
ORGLA01G0213300
Oryza glaberrima
ORGLA01G0213300
I
0.920
ORGLA06G0096700
Oryza glaberrima
ORGLA06G0096700
I
0.920
ORUFI06G10770
Oryza rufipogon
ORUFI06G10770
I
0.920
PRUPE_ppa006948mg
Prunus persica
PRUPE_ppa006948mg
I
0.920
Aquca_036_00051
Aquilegia coerulea
Aquca_036_00051
I
0.920
OLONG_014922
Oryza longistaminata
OLONG_014922
I
0.919
BGIOSGA022664
Oryza indica
BGIOSGA022664
I
0.918
Si006639m.g
Setaria italica
Si006639m.g
I
0.918
Bo1g016630
Brassica oleracea
Bo1g016630
I
0.916
Bo7g113660
Brassica oleracea
Bo7g113660
I
0.916
Bra011090
Brassica rapa
Bra011090
I
0.916
Bra024152
Brassica rapa
Bra024152
I
0.916
GSMUA_Achr2G16590_001
Musa acuminata
GSMUA_Achr2G16590_001
I
0.916
GSMUA_AchrUn_randomG28610_001
Musa acuminata
GSMUA_AchrUn_randomG28610_001
I
0.916
MDP0000124509
Malus domestica
MDP0000124509
I
0.916
Thhalv10024980m.g
Eutrema salsugineum
Thhalv10024980m.g
I
0.916
anac075
Arabidopsis thaliana
AT4G29230
D
0.915
BRADI1G43840
Brachypodium distachyon
BRADI1G43840
I
0.915
anac075
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7001013
I
0.915
GLYMA01G00880
Glycine max
GLYMA01G00880
I
0.915
GLYMA08G03590
Glycine max
GLYMA08G03590
I
0.915
OB06G19430
Oryza brachyantha
OB06G19430
I
0.915
OPUNC01G25960
Oryza punctata
OPUNC01G25960
I
0.915
ORUFI01G29010
Oryza rufipogon
ORUFI01G29010
I
0.915
TCM_037747
Theobroma cacao
TCM_037747
I
0.915
VIT_11s0016g02880
Vitis vinifera
VIT_11s0016g02880
I
0.915
29912.m005354
Ricinus communis
29912.m005354
I
0.915
cassava11584.m1
Manihot esculenta
cassava11584.m1
I
0.915
cassava44586.m1
Manihot esculenta
cassava44586.m1
I
0.915
Bostr.7867s0767
Boechera stricta
Bostr.7867s0767
I
0.915
Cagra.0495s0057
Capsella grandiflora
Cagra.0495s0057
I
0.915
Carubv10004602m.g
Capsella rubella
Carubv10004602m.g
I
0.915
Eucgr.C00958
Eucalyptus grandis
Eucgr.C00958
I
0.915
evm.TU.supercontig_78.40
Carica papaya
evm.TU.supercontig_78.40
I
0.915
gene11344-v1.0-hybrid
Fragaria vesca
gene11344-v1.0-hybrid
I
0.915
Gorai.009G028900
Gossypium raimondii
Gorai.009G028900
I
0.915
Gorai.010G078900
Gossypium raimondii
Gorai.010G078900
I
0.915
BGIOSGA001044
Oryza indica
BGIOSGA001044
I
0.914
POPTR_0006s15740
Populus trichocarpa
POPTR_0006s15740
I
0.914
POPTR_0018s06790
Populus trichocarpa
POPTR_0018s06790
I
0.914
Cla011431
Citrullus lanatus
Cla011431
I
0.914
Cucsa.288680
Cucumis sativus
Cucsa.288680
I
0.914
SapurV1A.0212s0190
Salix purpurea
SapurV1A.0212s0190
I
0.914
GLYMA05G36031
Glycine max
GLYMA05G36031
I
0.913
PGSC0003DMG400016896
Solanum tuberosum
PGSC0003DMG400016896
I
0.913
PRUPE_ppa004775mg
Prunus persica
PRUPE_ppa004775mg
I
0.913
Si017393m.g
Setaria italica
Si017393m.g
I
0.913
Solyc05g026180.1
Solanum lycopersicum
Solyc05g026180.1
I
0.913
Pm027280
Prunus mume
Pm027280
I
0.913
PK27085.1
Cannabis sativa
PK27085.1
D
0.913
BGIOSGA002220
Oryza indica
BGIOSGA002220
I
0.912
F775_07141
Aegilops tauschii
F775_07141
I
0.912
LPERR01G05530
Leersia perrieri
LPERR01G05530
I
0.912
LPERR01G22300
Leersia perrieri
LPERR01G22300
I
0.912
OB01G15780
Oryza brachyantha
OB01G15780
I
0.912
OBART01G05840
Oryza barthii
OBART01G05840
I
0.912
OGLUM01G06390
Oryza glumaepatula
OGLUM01G06390
I
0.912
OLONG_008708
Oryza longistaminata
OLONG_008708
I
0.912
ONIVA01G06690
Oryza nivara
ONIVA01G06690
I
0.912
OPUNC01G05680
Oryza punctata
OPUNC01G05680
I
0.912
ORGLA01G0055000
Oryza glaberrima
ORGLA01G0055000
I
0.912
ORUFI01G06380
Oryza rufipogon
ORUFI01G06380
I
0.912
OS01G0191300
Oryza sativa
OS01G0191300
I
0.912
TCM_016984
Theobroma cacao
TCM_016984
I
0.912
TRIUR3_31341
Triticum urartu
TRIUR3_31341
I
0.912
SapurV1A.1259s0030
Salix purpurea
SapurV1A.1259s0030
I
0.912
Pavir.Da01643
Panicum virgatum
Pavir.Da01643
I
0.911
GSMUA_Achr6G27000_001
Musa acuminata
GSMUA_Achr6G27000_001
I
0.910
OPUNC06G09830
Oryza punctata
OPUNC06G09830
I
0.909
VIT_14s0066g00360
Vitis vinifera
VIT_14s0066g00360
I
0.909
Ciclev10015507m.g
Citrus clementina
Ciclev10015507m.g
I
0.909
PK28347.1
Cannabis sativa
PK28347.1
I
0.909
OGLUM01G29870
Oryza glumaepatula
OGLUM01G29870
I
0.908
ONIVA01G29490
Oryza nivara
ONIVA01G29490
I
0.908
cassava46566.m1
Manihot esculenta
cassava46566.m1
I
0.908
Eucgr.K01061
Eucalyptus grandis
Eucgr.K01061
I
0.907
F775_07518
Aegilops tauschii
F775_07518
I
0.906
Traes_7BS_99BF8BA2F
Triticum aestivum
Traes_7BS_99BF8BA2F
I
0.906
Traes_7DS_78B5508C0
Triticum aestivum
Traes_7DS_78B5508C0
I
0.906
Ciclev10017822m.g
Citrus clementina
Ciclev10017822m.g
I
0.905
orange1.1g021635m.g
Citrus sinensis
orange1.1g021635m.g
I
0.905
Pavir.Aa01341
Panicum virgatum
Pavir.Aa01341
I
0.905
GRMZM2G166721
Zea mays
GRMZM2G166721
I
0.904
Sb03g003170
Sorghum bicolor
Sb03g003170
I
0.904
Si001527m.g
Setaria italica
Si001527m.g
I
0.904
Pavir.Eb00261
Panicum virgatum
Pavir.Eb00261
I
0.904
Pavir.J13205
Panicum virgatum
Pavir.J13205
I
0.904
GSMUA_Achr4G30940_001
Musa acuminata
GSMUA_Achr4G30940_001
I
0.903
GSMUA_Achr6G05480_001
Musa acuminata
GSMUA_Achr6G05480_001
I
0.903
GRMZM2G112681
Zea mays
GRMZM2G112681
I
0.902
GSMUA_Achr7G09510_001
Musa acuminata
GSMUA_Achr7G09510_001
I
0.902
GLYMA07G15180
Glycine max
GLYMA07G15180
I
0.898
TRIUR3_21992
Triticum urartu
TRIUR3_21992
I
0.896
Pavir.Eb02718
Panicum virgatum
Pavir.Eb02718
I
0.896
GLYMA05G09110
Glycine max
GLYMA05G09110
I
0.895
Traes_7AS_6E6A5CD04
Triticum aestivum
Traes_7AS_6E6A5CD04
I
0.895
LPERR05G21400
Leersia perrieri
LPERR05G21400
I
0.890
POPTR_0001s35490
Populus trichocarpa
POPTR_0001s35490
I
0.890
PDK_20s1381351g001
Phoenix dactylifera
PDK_20s1381351g001
I
0.890
BRADI3G47627
Brachypodium distachyon
BRADI3G47627
I
0.888
Cucsa.126960
Cucumis sativus
Cucsa.126960
I
0.888
MTR_4g078875
Medicago truncatula
MTR_4g078875
I
0.886
Si019444m.g
Setaria italica
Si019444m.g
I
0.886
Pavir.Aa00442
Panicum virgatum
Pavir.Aa00442
I
0.886
BGIOSGA020356
Oryza indica
BGIOSGA020356
I
0.885
OBART05G25770
Oryza barthii
OBART05G25770
I
0.885
OGLUM05G27400
Oryza glumaepatula
OGLUM05G27400
I
0.885
OLONG_018487
Oryza longistaminata
OLONG_018487
I
0.885
OMERI02G35510
Oryza meridionalis
OMERI02G35510
I
0.885
ONIVA05G27670
Oryza nivara
ONIVA05G27670
I
0.885
OPUNC05G23360
Oryza punctata
OPUNC05G23360
I
0.885
ORGLA05G0222500
Oryza glaberrima
ORGLA05G0222500
I
0.885
ORUFI05G27670
Oryza rufipogon
ORUFI05G27670
I
0.885
OS05G0563000
Oryza sativa
OS05G0563000
I
0.885
POPTR_0008s11550
Populus trichocarpa
POPTR_0008s11550
I
0.884
Gorai.006G034600
Gossypium raimondii
Gorai.006G034600
I
0.884
BRADI2G46197
Brachypodium distachyon
BRADI2G46197
I
0.883
OB05G33280
Oryza brachyantha
OB05G33280
I
0.883
cassava14633.m1
Manihot esculenta
cassava14633.m1
I
0.883
PRUPE_ppa008828mg
Prunus persica
PRUPE_ppa008828mg
I
0.882
mgf012882m
Mimulus guttatus
mgf012882m
I
0.882
NAC010
Arabidopsis thaliana
AT1G28470
D
0.881
Bo5g055990
Brassica oleracea
Bo5g055990
I
0.881
Bra032910
Brassica rapa
Bra032910
I
0.881
MTR_4g088245
Medicago truncatula
MTR_4g088245
I
0.881
MTR_8g069160
Medicago truncatula
MTR_8g069160
I
0.881
ANAC010
Arabidopsis lyrata
scaffold_103183.1
I
0.881
Cagra.1822s0012
Capsella grandiflora
Cagra.1822s0012
I
0.881
Carubv10009638m.g
Capsella rubella
Carubv10009638m.g
I
0.881
Gorai.010G157600
Gossypium raimondii
Gorai.010G157600
I
0.881
Thhalv10008249m.g
Eutrema salsugineum
Thhalv10008249m.g
I
0.881
F775_30638
Aegilops tauschii
F775_30638
I
0.879
GLYMA07G32250
Glycine max
GLYMA07G32250
I
0.879
GLYMA12G13710
Glycine max
GLYMA12G13710
I
0.879
Traes_6BL_B27806C89
Triticum aestivum
Traes_6BL_B27806C89
I
0.879
Traes_6DL_2F3586557
Triticum aestivum
Traes_6DL_2F3586557
I
0.879
Gorai.007G075300
Gossypium raimondii
Gorai.007G075300
I
0.879
OPUNC05G05600
Oryza punctata
OPUNC05G05600
I
0.878
PRUPE_ppa005648mg
Prunus persica
PRUPE_ppa005648mg
I
0.878
TCM_029798
Theobroma cacao
TCM_029798
I
0.877
Pm010104
Prunus mume
Pm010104
I
0.877
30190.m010767
Ricinus communis
30190.m010767
I
0.877
cassava1596.valid.m1
Manihot esculenta
cassava1596.valid.m1
I
0.877
Eucgr.J02254
Eucalyptus grandis
Eucgr.J02254
I
0.877
MDP0000276278
Malus domestica
MDP0000276278
I
0.877
MDP0000309351
Malus domestica
MDP0000309351
I
0.877
PGSC0003DMG400009381
Solanum tuberosum
PGSC0003DMG400009381
I
0.876
POPTR_0007s01350
Populus trichocarpa
POPTR_0007s01350
I
0.876
Solyc07g053590.2
Solanum lycopersicum
Solyc07g053590.2
I
0.876
ANAC010
Vitis vinifera
VIT_10s0003g00350
I
0.876
Ca_06348
Cicer arietinum
Ca_06348
I
0.876
GLYMA06G44250
Glycine max
GLYMA06G44250
I
0.875
Sb09g006015
Sorghum bicolor
Sb09g006015
I
0.875
Ca_02457
Cicer arietinum
Ca_02457
I
0.875
Ca_11273
Cicer arietinum
Ca_11273
I
0.875
Pavir.Ab02181
Panicum virgatum
Pavir.Ab02181
I
0.875
AMTR_s00021p00209320
Amborella trichopoda
AMTR_s00021p00209320
I
0.874
GSMUA_Achr3G07330_001
Musa acuminata
GSMUA_Achr3G07330_001
I
0.874
gene29766-v1.0-hybrid
Fragaria vesca
gene29766-v1.0-hybrid
I
0.874
Bo7g047040
Brassica oleracea
Bo7g047040
I
0.873
GLYMA13G24320
Glycine max
GLYMA13G24320
I
0.873
evm.TU.supercontig_83.99
Carica papaya
evm.TU.supercontig_83.99
I
0.872
Bra024733
Brassica rapa
Bra024733
I
0.871
MDP0000663564
Malus domestica
MDP0000663564
I
0.871