CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMPREF1541_03315
(
Cyphellophora europaea
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
HMPREF1541_03315
T193745_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-1
M01236_2.00
Neurospora crassa
MCGATCGM
KCGATCGK
PBM
Lambert et al.(2019)
pTH9706
0.865
0.917
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETN41380
GATA
900
935
CANCHTRVTPEWRRGPSGQRDLCNSCGLRWAKQNGR
Links
Other
GATA
family TFs
Other
Cyphellophora europaea
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LotgiG159035
Lottia gigantea
LotgiG159035
N
SPU_001113
Strongylocentrotus purpuratus
SPU_001113
N
D917_07943
Trichinella nativa
D917_07943
N
D918_04200
Trichuris suis
D918_04200
N
TMUE_s0044003300
Trichuris muris
TMUE_s0044003300
N
TTRE_0000063401
Trichuris trichiura
TTRE_0000063401
N