CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHSY_001107
(
Pseudozyma hubeiensis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PHSY_001107
T194764_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.845
0.861
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GAC93542
GATA
722
757
CTDCGRVDSPEWRKGPLGPKTLCNACGLRWAKKIKR
Links
Other
GATA
family TFs
Other
Pseudozyma hubeiensis
TFs
155 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0002s08740
Populus trichocarpa
POPTR_0002s08740
N
POPTR_0005s15990
Populus trichocarpa
POPTR_0005s15990
N
Cla000688
Citrullus lanatus
Cla000688
N
29908.m006148
Ricinus communis
29908.m006148
N
Cucsa.248460
Cucumis sativus
Cucsa.248460
N
Ciclev10002696m.g
Citrus clementina
Ciclev10002696m.g
N
Eucgr.F03759
Eucalyptus grandis
Eucgr.F03759
N
evm.TU.supercontig_36.17
Carica papaya
evm.TU.supercontig_36.17
N
gene11124-v1.0-hybrid
Fragaria vesca
gene11124-v1.0-hybrid
N
Gorai.009G243500
Gossypium raimondii
Gorai.009G243500
N
Gorai.010G048300
Gossypium raimondii
Gorai.010G048300
N
Lus10028073.g
Linum usitatissimum
Lus10028073.g
N
orange1.1g030905m.g
Citrus sinensis
orange1.1g030905m.g
N
SapurV1A.0010s0820
Salix purpurea
SapurV1A.0010s0820
N