POPTR_0005s15990 (Populus trichocarpa)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 POPTR_0005s15990 T165104_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s15990.1 CSD 7 73

Links

Other CSD family TFs
Other Populus trichocarpa TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0002s08740 Populus trichocarpa POPTR_0002s08740 N 0.939
SapurV1A.0010s0820 Salix purpurea SapurV1A.0010s0820 N 0.924
29908.m006148 Ricinus communis 29908.m006148 N 0.909
gene11124-v1.0-hybrid Fragaria vesca gene11124-v1.0-hybrid N 0.864
Ciclev10002696m.g Citrus clementina Ciclev10002696m.g N 0.848
Lus10028073.g Linum usitatissimum Lus10028073.g N 0.848
orange1.1g030905m.g Citrus sinensis orange1.1g030905m.g N 0.848
TCM_035057 Theobroma cacao TCM_035057 N 0.833
evm.TU.supercontig_36.17 Carica papaya evm.TU.supercontig_36.17 N 0.833
Gorai.009G243500 Gossypium raimondii Gorai.009G243500 N 0.833
Gorai.010G048300 Gossypium raimondii Gorai.010G048300 N 0.788
Eucgr.F03759 Eucalyptus grandis Eucgr.F03759 N 0.758
Cla000688 Citrullus lanatus Cla000688 N 0.742
Cucsa.248460 Cucumis sativus Cucsa.248460 N 0.742
mgf020853m Mimulus guttatus mgf020853m N 0.742
BGIOSGA027713 Oryza indica BGIOSGA027713 N 0.727
OGLUM08G01920 Oryza glumaepatula OGLUM08G01920 N 0.727
OMERI08G01940 Oryza meridionalis OMERI08G01940 N 0.727
ONIVA08G01720 Oryza nivara ONIVA08G01720 N 0.727
ORGLA08G0012100 Oryza glaberrima ORGLA08G0012100 N 0.727
ORUFI08G02050 Oryza rufipogon ORUFI08G02050 N 0.727
OS08G0129200 Oryza sativa OS08G0129200 N 0.727
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.727
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N 0.727
PK01533.1 Cannabis sativa PK01533.1 N 0.727
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N 0.727
GLYMA06G11560 Glycine max GLYMA06G11560 N 0.712
LPERR08G02000 Leersia perrieri LPERR08G02000 N 0.712
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.712
Gorai.002G003500 Gossypium raimondii Gorai.002G003500 N 0.712