estExt_fgenesh1_pg.C_10541 (Coccomyxa subellipsoidea C169)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 estExt_fgenesh1_pg.C_10541 T165434_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
45992 CSD 7 73

Links

Other CSD family TFs
Other Coccomyxa subellipsoidea C169 TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N 1.000
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.818
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N 0.803
ONIVA02G01490 Oryza nivara ONIVA02G01490 N 0.803
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N 0.803
gw1.103.78.1 Physcomitrella patens gw1.103.78.1 N 0.803
IGS.gm_9_00317 Chlorella NC64A IGS.gm_9_00317 N 0.803
BGIOSGA007226 Oryza indica BGIOSGA007226 N 0.788
LPERR02G01370 Leersia perrieri LPERR02G01370 N 0.788
OGLUM02G01470 Oryza glumaepatula OGLUM02G01470 N 0.788
OMERI02G00930 Oryza meridionalis OMERI02G00930 N 0.788
OPUNC02G01060 Oryza punctata OPUNC02G01060 N 0.788
ORUFI02G01580 Oryza rufipogon ORUFI02G01580 N 0.788
OS02G0121100 Oryza sativa OS02G0121100 N 0.788
estExt_gwp_gw1.C_410063 Physcomitrella patens estExt_gwp_gw1.C_410063 N 0.788
estExt_gwp_gw1.C_640002 Physcomitrella patens estExt_gwp_gw1.C_640002 N 0.788
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N 0.773
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.773
OBART02G01600 Oryza barthii OBART02G01600 N 0.773
ORGLA02G0014700 Oryza glaberrima ORGLA02G0014700 N 0.773
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.773
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.773
fgenesh1_pg.1_#_433 Coccomyxa subellipsoidea C169 fgenesh1_pg.1_#_433 N 0.773
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.773
e_gw1.1.536.1 Chlorella vulgaris e_gw1.1.536.1 N 0.773
AMTR_s00017p00206510 Amborella trichopoda AMTR_s00017p00206510 N 0.758
BRADI1G02640 Brachypodium distachyon BRADI1G02640 N 0.758
CHLREDRAFT_126810 Chlamydomonas reinhardtii CHLREDRAFT_126810 N 0.758
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.758
Pavir.J33349 Panicum virgatum Pavir.J33349 N 0.758
Pavir.Ab00211 Panicum virgatum Pavir.Ab00211 N 0.746
GLYMA11G11290 Glycine max GLYMA11G11290 N 0.742
SELMODRAFT_186937 Selaginella moellendorffii SELMODRAFT_186937 N 0.742
SELMODRAFT_187582 Selaginella moellendorffii SELMODRAFT_187582 N 0.742
Ca_11038 Cicer arietinum Ca_11038 N 0.742
Pm020837 Prunus mume Pm020837 I 0.742
estExt_Genewise1Plus.C_10818 Volvox carteri estExt_Genewise1Plus.C_10818 N 0.742
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.742
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.742
Lus10005066.g Linum usitatissimum Lus10005066.g N 0.742
Lus10027839.g Linum usitatissimum Lus10027839.g N 0.742
PK01533.1 Cannabis sativa PK01533.1 N 0.742
ETH_00029175 Eimeria tenella ETH_00029175 N 0.738
BGIOSGA027713 Oryza indica BGIOSGA027713 N 0.727
GLYMA12G03470 Glycine max GLYMA12G03470 N 0.727
LPERR08G02000 Leersia perrieri LPERR08G02000 N 0.727
OGLUM08G01920 Oryza glumaepatula OGLUM08G01920 N 0.727
OMERI08G01940 Oryza meridionalis OMERI08G01940 N 0.727
ONIVA08G01720 Oryza nivara ONIVA08G01720 N 0.727
ORGLA08G0012100 Oryza glaberrima ORGLA08G0012100 N 0.727
ORUFI08G02050 Oryza rufipogon ORUFI08G02050 N 0.727
OS08G0129200 Oryza sativa OS08G0129200 N 0.727
POPTR_0005s15990 Populus trichocarpa POPTR_0005s15990 N 0.727
Sb06g029650 Sorghum bicolor Sb06g029650 N 0.727
Gorai.005G253200 Gossypium raimondii Gorai.005G253200 I 0.727
MDP0000121628 Malus domestica MDP0000121628 N 0.727
Bo7g049880 Brassica oleracea Bo7g049880 I 0.712
BRADI2G07090 Brachypodium distachyon BRADI2G07090 N 0.712
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I 0.712
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I 0.712
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.712
mgf015980m Mimulus guttatus mgf015980m I 0.712
gene11124-v1.0-hybrid Fragaria vesca gene11124-v1.0-hybrid N 0.712
MDP0000155077 Malus domestica MDP0000155077 N 0.712
MDP0000202739 Malus domestica MDP0000202739 N 0.712