MDP0000202739 (Malus domestica)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 MDP0000202739 T165471_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000202739 CSD 5 71

Links

Other CSD family TFs
Other Malus domestica TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000155077 Malus domestica MDP0000155077 N 1.000
MDP0000225222 Malus domestica MDP0000225222 N 0.985
Pm020837 Prunus mume Pm020837 I 0.864
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.833
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.818
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.803
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.788
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I 0.773
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.773
Gorai.005G253200 Gossypium raimondii Gorai.005G253200 I 0.773
Lus10005066.g Linum usitatissimum Lus10005066.g N 0.773
Lus10027839.g Linum usitatissimum Lus10027839.g N 0.773
PK03316.1 Cannabis sativa PK03316.1 N 0.773
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.758
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.758
Solyc01g111300.2 Solanum lycopersicum Solyc01g111300.2 N 0.758
Cla016088 Citrullus lanatus Cla016088 N 0.758
Cucsa.381750 Cucumis sativus Cucsa.381750 N 0.758
mgf001526m Mimulus guttatus mgf001526m N 0.758
mgf014458m Mimulus guttatus mgf014458m N 0.758
mgf015980m Mimulus guttatus mgf015980m I 0.758
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.758
Pavir.J33349 Panicum virgatum Pavir.J33349 N 0.758
AMTR_s00017p00206510 Amborella trichopoda AMTR_s00017p00206510 N 0.742
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N 0.742
PGSC0003DMG400001590 Solanum tuberosum PGSC0003DMG400001590 N 0.742
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I 0.742
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N 0.742
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.742
Gorai.002G195000 Gossypium raimondii Gorai.002G195000 I 0.742
Gorai.002G195100 Gossypium raimondii Gorai.002G195100 I 0.742
Lus10025058.g Linum usitatissimum Lus10025058.g N 0.742
SapurV1A.0117s0150 Salix purpurea SapurV1A.0117s0150 N 0.742
Pavir.Ab00211 Panicum virgatum Pavir.Ab00211 N 0.730
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N 0.727
SELMODRAFT_186937 Selaginella moellendorffii SELMODRAFT_186937 N 0.727
SELMODRAFT_187582 Selaginella moellendorffii SELMODRAFT_187582 N 0.727
fgenesh1_pg.1_#_433 Coccomyxa subellipsoidea C169 fgenesh1_pg.1_#_433 N 0.727
e_gw1.1.536.1 Chlorella vulgaris e_gw1.1.536.1 N 0.727
BGIOSGA007226 Oryza indica BGIOSGA007226 N 0.712
Bo4g145670 Brassica oleracea Bo4g145670 I 0.712
Bo7g049880 Brassica oleracea Bo7g049880 I 0.712
BRADI1G02640 Brachypodium distachyon BRADI1G02640 N 0.712
ATGRP2B Arabidopsis lyrata fgenesh2_kg.4__14__AT2G21060.1 I 0.712
GLYMA11G11290 Glycine max GLYMA11G11290 N 0.712
LPERR02G01370 Leersia perrieri LPERR02G01370 N 0.712
OBART02G01600 Oryza barthii OBART02G01600 N 0.712
OGLUM02G01470 Oryza glumaepatula OGLUM02G01470 N 0.712
OMERI02G00930 Oryza meridionalis OMERI02G00930 N 0.712
ONIVA02G01490 Oryza nivara ONIVA02G01490 N 0.712
OPUNC02G01060 Oryza punctata OPUNC02G01060 N 0.712
ORGLA02G0014700 Oryza glaberrima ORGLA02G0014700 N 0.712
ORUFI02G01580 Oryza rufipogon ORUFI02G01580 N 0.712
OS02G0121100 Oryza sativa OS02G0121100 N 0.712
POPTR_0004s17840 Populus trichocarpa POPTR_0004s17840 N 0.712
POPTR_0009s13460 Populus trichocarpa POPTR_0009s13460 N 0.712
Ciclev10002696m.g Citrus clementina Ciclev10002696m.g N 0.712
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N 0.712
Gorai.002G003500 Gossypium raimondii Gorai.002G003500 N 0.712
MDP0000121628 Malus domestica MDP0000121628 N 0.712
orange1.1g030905m.g Citrus sinensis orange1.1g030905m.g N 0.712
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N 0.712
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N 0.712
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N 0.712
Eucgr.I01395 Eucalyptus grandis Eucgr.I01395 N 0.707