fgenesh1_pg.1_#_433 (Coccomyxa subellipsoidea C169)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 fgenesh1_pg.1_#_433 T165445_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
39240 CSD 13 79

Links

Other CSD family TFs
Other Coccomyxa subellipsoidea C169 TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.1.536.1 Chlorella vulgaris e_gw1.1.536.1 N 1.000
estExt_gwp_gw1.C_410063 Physcomitrella patens estExt_gwp_gw1.C_410063 N 0.803
estExt_gwp_gw1.C_640002 Physcomitrella patens estExt_gwp_gw1.C_640002 N 0.803
gw1.103.78.1 Physcomitrella patens gw1.103.78.1 N 0.803
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.788
IGS.gm_9_00317 Chlorella NC64A IGS.gm_9_00317 N 0.787
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N 0.773
PK01533.1 Cannabis sativa PK01533.1 N 0.773
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N 0.773
AMTR_s00017p00206510 Amborella trichopoda AMTR_s00017p00206510 N 0.758
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.758
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.758
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N 0.758
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.758
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.758
Pavir.J33349 Panicum virgatum Pavir.J33349 N 0.758
BGIOSGA007226 Oryza indica BGIOSGA007226 N 0.742
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N 0.742
CHLREDRAFT_126810 Chlamydomonas reinhardtii CHLREDRAFT_126810 N 0.742
LPERR02G01370 Leersia perrieri LPERR02G01370 N 0.742
OBART02G01600 Oryza barthii OBART02G01600 N 0.742
OGLUM02G01470 Oryza glumaepatula OGLUM02G01470 N 0.742
OMERI02G00930 Oryza meridionalis OMERI02G00930 N 0.742
OPUNC02G01060 Oryza punctata OPUNC02G01060 N 0.742
ORGLA02G0014700 Oryza glaberrima ORGLA02G0014700 N 0.742
ORUFI02G01580 Oryza rufipogon ORUFI02G01580 N 0.742
OS02G0121100 Oryza sativa OS02G0121100 N 0.742
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.742
Pavir.Ab00211 Panicum virgatum Pavir.Ab00211 N 0.730
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N 0.727
EMIHUDRAFT_78118 Emiliania huxleyi EMIHUDRAFT_78118 N 0.727
ONIVA02G01490 Oryza nivara ONIVA02G01490 N 0.727
SELMODRAFT_186937 Selaginella moellendorffii SELMODRAFT_186937 N 0.727
SELMODRAFT_187582 Selaginella moellendorffii SELMODRAFT_187582 N 0.727
Pm020837 Prunus mume Pm020837 I 0.727
AZW_EuGene.0000110131 Micromonas pusilla AZW_EuGene.0000110131 N 0.727
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.727
mgf015980m Mimulus guttatus mgf015980m I 0.727
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.727
MDP0000155077 Malus domestica MDP0000155077 N 0.727
MDP0000202739 Malus domestica MDP0000202739 N 0.727
OB02G23180 Oryza brachyantha OB02G23180 I 0.718
Bo7g049880 Brassica oleracea Bo7g049880 I 0.712
BRADI1G02640 Brachypodium distachyon BRADI1G02640 N 0.712
SELMODRAFT_154869 Selaginella moellendorffii SELMODRAFT_154869 N 0.712
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I 0.712
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.712
MDP0000225222 Malus domestica MDP0000225222 N 0.712
SELMODRAFT_123455 Selaginella moellendorffii SELMODRAFT_123455 N 0.709