CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ECM23 *(Saccharomyces cerevisiae)* GATA
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00320 (GATA)	IPR000679	YPL021W	T195745_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ECM23 M00054_2.00	Saccharomyces cerevisiae	DAGATCYV	BRGATCTH	PBM Badis et al.(2008) ECM23_2123	(Direct)	(Direct)
ECM23 M07483_2.00	Saccharomyces cerevisiae	NNAGATCNNNN	NNNNGATCTNN	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0293.1	(Direct)	(Direct)
ECM23 M08566_2.00	Saccharomyces cerevisiae	NNAGATCNNNN	NNNNGATCTNN	Misc DeBoer et al.(2011) YPL021W_578	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
For this family, TFs with SR scores > 0.802* will likely have a similar motif*

Experimental Constructs

Motif ID	Domain	From	To	Sequence
M00054_2.00	GATA	51	86	CATCGDTWTSQWRSGPNGNVELCSRCGIAYRKKMEK

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
YPL021W	GATA	132	167	CATCGDTWTSQWRSGPNGNVELCSRCGIAYRKKMEK

Links
Other GATA family TFs
Other *Saccharomyces cerevisiae* TFs