Carubv10016941m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10016941m.g T286361_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10016941m Myb 307 355

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0612s0070 Capsella grandiflora Cagra.0612s0070 N 0.909
AT3G53440 Arabidopsis thaliana AT3G53440 N 0.905
fgenesh2_kg.5__1710__AT3G53440.2 Arabidopsis lyrata fgenesh2_kg.5__1710__AT3G53440.2 N 0.905
Bostr.11793s0050 Boechera stricta Bostr.11793s0050 N 0.905
Thhalv10010289m.g Eutrema salsugineum Thhalv10010289m.g N 0.826
Bo8g082820 Brassica oleracea Bo8g082820 N 0.786
Bo8g082840 Brassica oleracea Bo8g082840 N 0.786
AMTR_s00044p00144500 Amborella trichopoda AMTR_s00044p00144500 N 0.753
PK06741.1 Cannabis sativa PK06741.1 N 0.744
evm.TU.supercontig_129.20 Carica papaya evm.TU.supercontig_129.20 N 0.724
PRUPE_ppa003947mg Prunus persica PRUPE_ppa003947mg N 0.709
Pm002284 Prunus mume Pm002284 N 0.709
POPTR_0018s04230 Populus trichocarpa POPTR_0018s04230 N 0.698
mgf021292m Mimulus guttatus mgf021292m N 0.698
Lus10002159.g Linum usitatissimum Lus10002159.g N 0.675
VIT_17s0000g03540 Vitis vinifera VIT_17s0000g03540 N 0.665