29838.m001724 (Ricinus communis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 29838.m001724 T195994_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA28
M01996_2.00 		Arabidopsis thaliana
NNGATNN
NNATCNN		 PBM
Weirauch et al.(2014)
pTH7505 		0.848 0.833
GATA28
M06883_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATG
CATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
ZML2_col_a 		0.848 0.833
GATA24
M01941_2.00 		Arabidopsis thaliana
HGATBNN
NNVATCD		 PBM
Weirauch et al.(2014)
pTH7661 		0.837 0.833
OS06G0698900
M02015_2.00 		Oryza sativa
NNNNAHBNN
NNVDTNNNN		 PBM
Weirauch et al.(2014)
pTH8641 		0.837 0.833
ZIM
M06892_2.00 		Arabidopsis thaliana
AWYSRACGGYYVWGA
TCWBRRCCGTYSRWT		 Dap-seq
OMalley et al.(2016)
ZIM_col_a 		0.815 0.889
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29838.m001724 GATA 221 258

Links

Other GATA family TFs
Other Ricinus communis TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF7 Homo sapiens ENSG00000147789 D
ZNF7 Macaca mulatta ENSMMUG00000011550 I
ENSP00000393260 Macaca fascicularis ENSP00000393260 I
ENSSTOG00000021142 Ictidomys tridecemlineatus ENSSTOG00000021142 I
ZNF7 Pan troglodytes ENSPTRG00000020717 I
ENSPPYG00000018994 Pongo abelii ENSPPYG00000018994 I
ENSPANG00000012142 Papio anubis ENSPANG00000012142 I
ZNF7 Oryctolagus cuniculus ENSOCUG00000022081 I
ZNF7 Microcebus murinus ENSMICG00000000042 I
ZNF7 Gorilla gorilla ENSGGOG00000008185 I
ZNF7 Callithrix jacchus ENSCJAG00000021384 I
ENSAMEG00000005420 Ailuropoda melanoleuca ENSAMEG00000005420 N
ZNF7 Felis catus ENSFCAG00000012559 N
ZNF7 Sus scrofa ENSSSCG00000005890 N
ZNF7 Choloepus hoffmanni ENSCHOG00000001749 N
ENSP00000262259-D94 Bos grunniens ENSP00000262259-D94 N
ZNF7 Bos taurus ENSBTAG00000018456 N