CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.205230
(
Cucumis sativus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Cucsa.205230
T196056_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.205230.1
GATA
20
55
CVHCRATRTPLWRAGPAGPRSLCNACGIRYRKMKMN
Links
Other
GATA
family TFs
Other
Cucumis sativus
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene32198-v1.0-hybrid
Fragaria vesca
gene32198-v1.0-hybrid
I
0.000
BGIOSGA025449
Oryza indica
BGIOSGA025449
N
0.000
OB07G15500
Oryza brachyantha
OB07G15500
N
0.000
OBART07G07450
Oryza barthii
OBART07G07450
N
0.000
OBART07G08680
Oryza barthii
OBART07G08680
N
0.000
OGLUM07G07150
Oryza glumaepatula
OGLUM07G07150
N
0.000
OLONG_021151
Oryza longistaminata
OLONG_021151
N
0.000
OLONG_023640
Oryza longistaminata
OLONG_023640
N
0.000
OMERI07G07070
Oryza meridionalis
OMERI07G07070
N
0.000
ONIVA07G05990
Oryza nivara
ONIVA07G05990
N
0.000
OPUNC07G07180
Oryza punctata
OPUNC07G07180
N
0.000
OPUNC07G08180
Oryza punctata
OPUNC07G08180
N
0.000
ORGLA07G0062800
Oryza glaberrima
ORGLA07G0062800
N
0.000
ORGLA07G0073600
Oryza glaberrima
ORGLA07G0073600
N
0.000
ORUFI07G07460
Oryza rufipogon
ORUFI07G07460
N
0.000
ORUFI07G08780
Oryza rufipogon
ORUFI07G08780
N
0.000