CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIOSGA025449
(
Oryza indica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
BGIOSGA025449
T266920_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA025449-PA
Myb
94
140
KGGWTREEDEVLRQMVQHHGDRKWAEIAKSLPGRIGKQCRERWTNHL
BGIOSGA025449-PA
Myb
146
191
KGIWTEEEDRKLIRAHQTYGNRWSAIARSLPGRSENTVKNRWNATK
Links
Other
Myb/SANT
family TFs
Other
Oryza indica
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI07G08780
Oryza rufipogon
ORUFI07G08780
N
0.909
OMERI07G07070
Oryza meridionalis
OMERI07G07070
N
0.907
OPUNC07G08180
Oryza punctata
OPUNC07G08180
N
0.898
OLONG_023640
Oryza longistaminata
OLONG_023640
N
0.894
OGLUM07G07870
Oryza glumaepatula
OGLUM07G07870
N
0.886
ORGLA07G0073600
Oryza glaberrima
ORGLA07G0073600
N
0.882
ONIVA07G07540
Oryza nivara
ONIVA07G07540
N
0.879
OBART07G08680
Oryza barthii
OBART07G08680
N
0.873
OBART07G07450
Oryza barthii
OBART07G07450
N
0.851
OGLUM07G07150
Oryza glumaepatula
OGLUM07G07150
N
0.851
OLONG_021151
Oryza longistaminata
OLONG_021151
N
0.851
ORGLA07G0062800
Oryza glaberrima
ORGLA07G0062800
N
0.851
ORUFI07G07460
Oryza rufipogon
ORUFI07G07460
N
0.851
OPUNC07G07180
Oryza punctata
OPUNC07G07180
N
0.845
BGIOSGA024590
Oryza indica
BGIOSGA024590
N
0.844
ONIVA07G05990
Oryza nivara
ONIVA07G05990
N
0.797
ONIVA07G05980
Oryza nivara
ONIVA07G05980
N
0.790
BGIOSGA004824
Oryza indica
BGIOSGA004824
N
0.787
OBART01G37720
Oryza barthii
OBART01G37720
N
0.787
OLONG_012136
Oryza longistaminata
OLONG_012136
N
0.787
ONIVA01G42540
Oryza nivara
ONIVA01G42540
N
0.787
ORGLA01G0315200
Oryza glaberrima
ORGLA01G0315200
N
0.787
ORUFI01G41050
Oryza rufipogon
ORUFI01G41050
N
0.787
OS01G0855400
Oryza sativa
OS01G0855400
N
0.787
OB01G46450
Oryza brachyantha
OB01G46450
N
0.772
OPUNC01G36560
Oryza punctata
OPUNC01G36560
N
0.764
ORUFI07G07450
Oryza rufipogon
ORUFI07G07450
N
0.758
OBART07G07440
Oryza barthii
OBART07G07440
N
0.751
LPERR01G32380
Leersia perrieri
LPERR01G32380
N
0.747
GRMZM2G121570
Zea mays
GRMZM2G121570
N
0.708
Sb01g013830
Sorghum bicolor
Sb01g013830
N
0.684
Pavir.J13941
Panicum virgatum
Pavir.J13941
N
0.674
OB07G17380
Oryza brachyantha
OB07G17380
N
0.668