CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshDP_pg.C_80007
(
Dictyostelium purpureum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
estExt_fgeneshDP_pg.C_80007
T196133_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gtaE
M02006_2.00
Dictyostelium discoideum
NAGATBN
NVATCTN
PBM
Weirauch et al.(2014)
pTH5534
0.856
0.972
gtaG
M02007_2.00
Dictyostelium discoideum
NDNBAGATBN
NVATCTVNHN
PBM
Weirauch et al.(2014)
pTH5531
0.806
0.778
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshDP_pg.C_80007
GATA
91
126
CYQCNTSNTPEWRKGPDGPATLCNACGLAYAKKQKL
Links
Other
GATA
family TFs
Other
Dictyostelium purpureum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gtaE
Dictyostelium discoideum
DDB_G0267640
D
0.856
gtaG
Dictyostelium discoideum
DDB_G0270756
D
0.806
SPPG_06164
Spizellomyces punctatus
SPPG_06164
I
0.838
BN946_scf185014.g71
Trametes cinnabarina
BN946_scf185014.g71
I
0.817
ATEG_03152
Aspergillus terreus
CADATEAG00010089
I
0.807
NFIA_103630
Neosartorya fischeri
CADNFIAG00009503
I
0.807
KUCA_T00003418001
Kuraishia capsulata
KUCA_T00003418001
I
0.809
estExt_fgeneshDP_pg.C_260001
Dictyostelium purpureum
estExt_fgeneshDP_pg.C_260001
I
0.806
EFA77753.1
Polysphondylium pallidum
EFA77753.1
I
0.806
EFA76673.1
Polysphondylium pallidum
EFA76673.1
N
0.802