CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gtaG
(
Dictyostelium discoideum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
DDB_G0270756
T192467_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gtaG
M02007_2.00
Dictyostelium discoideum
NDNBAGATBN
NVATCTVNHN
PBM
Weirauch et al.(2014)
pTH5531
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gtaE
M02006_2.00
Dictyostelium discoideum
NAGATBN
NVATCTN
PBM
Weirauch et al.(2014)
pTH5534
0.806
0.778
For this family, TFs with SR scores >
0.802
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02007_2.00
GATA
44
79
CHNCGTKNTPEWRRGPSGPATLCNACGLAYAKKQRE
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DDB0220467
GATA
842
877
CHNCGTKNTPEWRRGPSGPATLCNACGLAYAKKQRE
Links
Other
GATA
family TFs
Other
Dictyostelium discoideum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshDP_pg.C_260001
Dictyostelium purpureum
estExt_fgeneshDP_pg.C_260001
I
0.867
EFA77753.1
Polysphondylium pallidum
EFA77753.1
I
0.825
gtaE
Dictyostelium discoideum
DDB_G0267640
D
0.806
estExt_fgeneshDP_pg.C_80007
Dictyostelium purpureum
estExt_fgeneshDP_pg.C_80007
I
0.806
NechaG104418
Fusarium solani
NechaG104418
I
0.805
estExt_fgenesh1_pm.C_sca_5_chr5_3_00060
Nectria haematococca
estExt_fgenesh1_pm.C_sca_5_chr5_3_00060
I
0.805
SPPG_06164
Spizellomyces punctatus
SPPG_06164
I
0.804
HMPREF1541_00640
Cyphellophora europaea
HMPREF1541_00640
I
0.802
fgeneshMC_pm.6_#_293
Mucor circinelloides
fgeneshMC_pm.6_#_293
I
0.802