Cagra.7149s0001 (Capsella grandiflora)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cagra.7149s0001 T196443_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.593 1.000
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.593 1.000
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.7149s0001.1.p GATA 95 114

Links

Other GATA family TFs
Other Capsella grandiflora TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_69131 Selaginella moellendorffii SELMODRAFT_69131 N 0.000
Ca_22941 Cicer arietinum Ca_22941 N 0.000
TRIUR3_25303 Triticum urartu TRIUR3_25303 N 0.000
Traes_5DL_36AE1EF2B Triticum aestivum Traes_5DL_36AE1EF2B N 0.000
Traes_5BS_9F043AE17 Triticum aestivum Traes_5BS_9F043AE17 N 0.000
Traes_5BL_456C3408A Triticum aestivum Traes_5BL_456C3408A N 0.000
Traes_5AS_E5FD82E36 Triticum aestivum Traes_5AS_E5FD82E36 N 0.000
Solyc07g066330.2 Solanum lycopersicum Solyc07g066330.2 N 0.000
Si030942m.g Setaria italica Si030942m.g N 0.000
Si022747m.g Setaria italica Si022747m.g N 0.000
Si014408m.g Setaria italica Si014408m.g N 0.000
Si006435m.g Setaria italica Si006435m.g N 0.000
Cla000384 Citrullus lanatus Cla000384 N 0.000
SELMODRAFT_69130 Selaginella moellendorffii SELMODRAFT_69130 N 0.000
Sb10g022130 Sorghum bicolor Sb10g022130 N 0.000
Sb03g031000 Sorghum bicolor Sb03g031000 N 0.000
Sb02g029460 Sorghum bicolor Sb02g029460 N 0.000
OS12G0610600 Oryza sativa OS12G0610600 N 0.000
OS09G0509100 Oryza sativa OS09G0509100 N 0.000
OS08G0535800 Oryza sativa OS08G0535800 N 0.000
ORUFI12G20640 Oryza rufipogon ORUFI12G20640 N 0.000
ORUFI08G24230 Oryza rufipogon ORUFI08G24230 N 0.000
ORUFI07G15560 Oryza rufipogon ORUFI07G15560 N 0.000
ORGLA12G0157500 Oryza glaberrima ORGLA12G0157500 N 0.000
Eucgr.K02205 Eucalyptus grandis Eucgr.K02205 N 0.000
Pavir.J24268 Panicum virgatum Pavir.J24268 N 0.000
Pavir.J23083 Panicum virgatum Pavir.J23083 N 0.000
Pavir.J11699 Panicum virgatum Pavir.J11699 N 0.000
Pavir.J04931 Panicum virgatum Pavir.J04931 N 0.000
Pavir.Fb00689 Panicum virgatum Pavir.Fb00689 N 0.000
Pavir.Db01277 Panicum virgatum Pavir.Db01277 N 0.000
Pavir.Da00789 Panicum virgatum Pavir.Da00789 N 0.000
Lus10034999.g Linum usitatissimum Lus10034999.g N 0.000
Lus10032004.g Linum usitatissimum Lus10032004.g N 0.000
Lus10012927.g Linum usitatissimum Lus10012927.g N 0.000
gene01364-v1.0-hybrid Fragaria vesca gene01364-v1.0-hybrid N 0.000
ORGLA09G0123200 Oryza glaberrima ORGLA09G0123200 N 0.000
Eucgr.I02578 Eucalyptus grandis Eucgr.I02578 N 0.000
Eucgr.H00826 Eucalyptus grandis Eucgr.H00826 N 0.000
Eucgr.G01053 Eucalyptus grandis Eucgr.G01053 N 0.000
Eucgr.G01047 Eucalyptus grandis Eucgr.G01047 N 0.000
Aquca_003_00875 Aquilegia coerulea Aquca_003_00875 N 0.000
mgf019352m Mimulus guttatus mgf019352m N 0.000
mgf006124m Mimulus guttatus mgf006124m N 0.000
Cucsa.157080 Cucumis sativus Cucsa.157080 N 0.000
Cucsa.087480 Cucumis sativus Cucsa.087480 N 0.000
Cla019597 Citrullus lanatus Cla019597 N 0.000
GRMZM2G100583 Zea mays GRMZM2G100583 N 0.000
OB12G25170 Oryza brachyantha OB12G25170 N 0.000
OB09G22520 Oryza brachyantha OB09G22520 N 0.000
MLOC_72553 Hordeum vulgare MLOC_72553 N 0.000
MLOC_64240 Hordeum vulgare MLOC_64240 N 0.000
MLOC_55957 Hordeum vulgare MLOC_55957 N 0.000
LPERR12G15510 Leersia perrieri LPERR12G15510 N 0.000
LPERR09G12100 Leersia perrieri LPERR09G12100 N 0.000
LPERR08G18520 Leersia perrieri LPERR08G18520 N 0.000
GRMZM2G179049 Zea mays GRMZM2G179049 N 0.000
GRMZM2G115721 Zea mays GRMZM2G115721 N 0.000
GRMZM2G114850 Zea mays GRMZM2G114850 N 0.000
OBART08G21800 Oryza barthii OBART08G21800 N 0.000
GRMZM2G054277 Zea mays GRMZM2G054277 N 0.000
GRMZM2G054252 Zea mays GRMZM2G054252 N 0.000
F775_31820 Aegilops tauschii F775_31820 N 0.000
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N 0.000
BRADI4G02060 Brachypodium distachyon BRADI4G02060 N 0.000
BRADI3G41470 Brachypodium distachyon BRADI3G41470 N 0.000
Bra002802 Brassica rapa Bra002802 N 0.000
Bo9g126190 Brassica oleracea Bo9g126190 N 0.000
BGIOSGA037778 Oryza indica BGIOSGA037778 N 0.000
BGIOSGA031062 Oryza indica BGIOSGA031062 N 0.000
BGIOSGA029063 Oryza indica BGIOSGA029063 N 0.000
OMERI09G11810 Oryza meridionalis OMERI09G11810 N 0.000
ORGLA08G0227400 Oryza glaberrima ORGLA08G0227400 N 0.000
ORGLA07G0123600 Oryza glaberrima ORGLA07G0123600 N 0.000
OPUNC12G16690 Oryza punctata OPUNC12G16690 N 0.000
OPUNC09G14320 Oryza punctata OPUNC09G14320 N 0.000
OPUNC08G19870 Oryza punctata OPUNC08G19870 N 0.000
ONIVA12G17390 Oryza nivara ONIVA12G17390 N 0.000
ONIVA09G17010 Oryza nivara ONIVA09G17010 N 0.000
ONIVA08G24840 Oryza nivara ONIVA08G24840 N 0.000
ONIVA07G13650 Oryza nivara ONIVA07G13650 N 0.000
ONIVA07G09980 Oryza nivara ONIVA07G09980 N 0.000
OMERI12G13180 Oryza meridionalis OMERI12G13180 N 0.000
BGIOSGA025747 Oryza indica BGIOSGA025747 N 0.000
OMERI07G11790 Oryza meridionalis OMERI07G11790 N 0.000
OMERI06G13840 Oryza meridionalis OMERI06G13840 N 0.000
OLONG_020119 Oryza longistaminata OLONG_020119 N 0.000
OGLUM12G20140 Oryza glumaepatula OGLUM12G20140 N 0.000
OGLUM09G16460 Oryza glumaepatula OGLUM09G16460 N 0.000
OGLUM08G23090 Oryza glumaepatula OGLUM08G23090 N 0.000
OGLUM07G14740 Oryza glumaepatula OGLUM07G14740 N 0.000
OGLUM02G04830 Oryza glumaepatula OGLUM02G04830 N 0.000
OBART12G18490 Oryza barthii OBART12G18490 N 0.000
OBART09G15890 Oryza barthii OBART09G15890 N 0.000