CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g126190
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo9g126190
T292489_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g126190.1
NAC/NAM
43
194
PAGVKFDPTDQELVEHLEAKVKGKEGNKKWFPSHPLIDEFIPTIDGEDGICYTHPQKLPGVTKDGLSKHFFHKPSRAYTTGTRKRRKIIQTEHDSELNGSSSETRWHKTGKTRPVMINGRQRGCKKILVLYTNFGKNRRPEKTNWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra002802
Brassica rapa
Bra002802
N
0.999
mgf019352m
Mimulus guttatus
mgf019352m
N
0.993
GRMZM2G115721
Zea mays
GRMZM2G115721
N
0.992
MLOC_72553
Hordeum vulgare
MLOC_72553
N
0.992
Si006435m.g
Setaria italica
Si006435m.g
N
0.992
Pavir.Da00789
Panicum virgatum
Pavir.Da00789
N
0.992
Pavir.Db01277
Panicum virgatum
Pavir.Db01277
N
0.992
Sb10g022130
Sorghum bicolor
Sb10g022130
N
0.991
Lus10012927.g
Linum usitatissimum
Lus10012927.g
N
0.991
Lus10034999.g
Linum usitatissimum
Lus10034999.g
N
0.991
Cla000384
Citrullus lanatus
Cla000384
N
0.986
Cucsa.087480
Cucumis sativus
Cucsa.087480
N
0.985
Traes_7DL_1913741A8
Triticum aestivum
Traes_7DL_1913741A8
N
0.978
Traes_7AL_EFD897AFC
Triticum aestivum
Traes_7AL_EFD897AFC
N
0.973
Carubv10028131m.g
Capsella rubella
Carubv10028131m.g
N
0.960
anac099
Arabidopsis thaliana
AT5G56620
N
0.956
anac099
Arabidopsis lyrata
fgenesh2_kg.8__1569__AT5G56620.1
N
0.956
Bostr.26833s0596
Boechera stricta
Bostr.26833s0596
N
0.956
Thhalv10015892m.g
Eutrema salsugineum
Thhalv10015892m.g
N
0.956
Cagra.4138s0026
Capsella grandiflora
Cagra.4138s0026
N
0.954
Sb03g031000
Sorghum bicolor
Sb03g031000
N
0.919
GRMZM2G179049
Zea mays
GRMZM2G179049
N
0.903
Pavir.J11699
Panicum virgatum
Pavir.J11699
N
0.900
Pavir.J23083
Panicum virgatum
Pavir.J23083
N
0.900
BRADI4G34800
Brachypodium distachyon
BRADI4G34800
N
0.895
GRMZM2G054277
Zea mays
GRMZM2G054277
N
0.895
Si030942m.g
Setaria italica
Si030942m.g
N
0.884
LPERR09G12100
Leersia perrieri
LPERR09G12100
N
0.882
BGIOSGA031062
Oryza indica
BGIOSGA031062
N
0.877
ONIVA09G17010
Oryza nivara
ONIVA09G17010
N
0.877
OBART09G15890
Oryza barthii
OBART09G15890
N
0.874
OGLUM09G16460
Oryza glumaepatula
OGLUM09G16460
N
0.874
OMERI09G11810
Oryza meridionalis
OMERI09G11810
N
0.874
ORGLA09G0123200
Oryza glaberrima
ORGLA09G0123200
N
0.874
OS09G0509100
Oryza sativa
OS09G0509100
N
0.874
ORUFI09G17170
Oryza rufipogon
ORUFI09G17170
N
0.871