MDP0000243535 (Malus domestica)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 MDP0000243535 T196672_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.461 1.000
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.461 1.000
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.461 1.000
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.461 1.000
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000243535 GATA 1 20

Links

Other GATA family TFs
Other Malus domestica TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TBF1 Saccharomyces cerevisiae YPL128C D
TPHA_0F03170 Tetrapisispora phaffii TPHA_0F03170 I
SAKL0H07678g Lachancea kluyveri SAKL0H07678g I
Kwal_8619 Kluyveromyces waltii Kwal_8619 I
KLTH0D10164g Kluyveromyces thermotolerans KLTH0D10164g I
25381_YPL128C Saccharomyces bayanus 25381_YPL128C I
22419_YPL128C Saccharomyces paradoxus 22419_YPL128C I
21800_YPL128C Saccharomyces mikatae 21800_YPL128C I
Scas_Contig700.45 Saccharomyces castellii Scas_Contig700.45 I
ZYRO0F06292g Zygosaccharomyces rouxii ZYRO0F06292g I
ZBAI_05815 Zygosaccharomyces bailii ZBAI_05815 I
ZBAI_00516 Zygosaccharomyces bailii ZBAI_00516 I
TPHA_0G01850 Tetrapisispora phaffii TPHA_0G01850 I
CAGL0M02761g Candida glabrata CAGL0M02761g I
TDEL_0A05760 Torulaspora delbrueckii TDEL_0A05760 I
TBLA_0B04080 Tetrapisispora blattae TBLA_0B04080 I
SU7_3534 Saccharomyces arboricola SU7_3534 I
SKUD_201904 Saccharomyces kudriavzevii SKUD_201904 I
NDAI_0E02210 Naumovozyma dairenensis NDAI_0E02210 I
LALA0_S10e01860g Lachancea lanzarotensis LALA0_S10e01860g I
Kpol_530p11 Vanderwaltozyma polyspora Kpol_530p11 I
Kpol_1072p42 Vanderwaltozyma polyspora Kpol_1072p42 I
KLTH0D10164g Lachancea thermotolerans KLTH0D10164g I
KLLA0_D06765g Kluyveromyces lactis KLLA0_D06765g I
KAFR_0H02660 Kazachstania africana KAFR_0H02660 I
Ecym_8316 Eremothecium cymbalariae Ecym_8316 I