Pavir.Ga01522 (Panicum virgatum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Pavir.Ga01522 T196745_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga01522.1.p GATA 7 42
Pavir.Ga01522.2.p GATA 7 42

Links

Other GATA family TFs
Other Panicum virgatum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa003888mg Prunus persica PRUPE_ppa003888mg N 0.867
PDK_20s1646281g001 Phoenix dactylifera PDK_20s1646281g001 N 0.827
Pavir.Gb01403 Panicum virgatum Pavir.Gb01403 N 0.867
Pavir.Gb01197 Panicum virgatum Pavir.Gb01197 N 0.862
Pavir.Ga00650 Panicum virgatum Pavir.Ga00650 N 0.867
MDP0000309356 Malus domestica MDP0000309356 N 0.867
estExt_fgenesh1_pg.C_90243 Physcomitrella patens estExt_fgenesh1_pg.C_90243 N 0.857
Cucsa.321290 Cucumis sativus Cucsa.321290 N 0.867
Cucsa.313750 Cucumis sativus Cucsa.313750 N 0.867
Pm023342 Prunus mume Pm023342 N 0.867
Si011929m.g Setaria italica Si011929m.g N 0.831
Si010863m.g Setaria italica Si010863m.g N 0.867
Sb06g024200 Sorghum bicolor Sb06g024200 N 0.867
Sb01g011980 Sorghum bicolor Sb01g011980 N 0.867
AMTR_s00002p00191340 Amborella trichopoda AMTR_s00002p00191340 N 0.867
OS04G0544500 Oryza sativa OS04G0544500 N 0.867
ORUFI04G22090 Oryza rufipogon ORUFI04G22090 N 0.867
ORGLA04G0175700 Oryza glaberrima ORGLA04G0175700 N 0.867
OPUNC04G18160 Oryza punctata OPUNC04G18160 N 0.867
ONIVA04G18740 Oryza nivara ONIVA04G18740 N 0.867
OMERI03G30900 Oryza meridionalis OMERI03G30900 N 0.867
OGLUM04G20450 Oryza glumaepatula OGLUM04G20450 N 0.867
OB04G27470 Oryza brachyantha OB04G27470 N 0.867
LPERR04G16610 Leersia perrieri LPERR04G16610 N 0.867
GSMUA_Achr4G17880_001 Musa acuminata GSMUA_Achr4G17880_001 N 0.867
GRMZM2G421212 Zea mays GRMZM2G421212 N 0.867
GRMZM2G077002 Zea mays GRMZM2G077002 N 0.867
BGIOSGA014620 Oryza indica BGIOSGA014620 N 0.867
AMTR_s00025p00250050 Amborella trichopoda AMTR_s00025p00250050 N 0.827