23503_YPL021W (Saccharomyces paradoxus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 23503_YPL021W T197015_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ECM23
M00054_2.00 		Saccharomyces cerevisiae
DAGATCYV
BRGATCTH		 PBM
Badis et al.(2008)
ECM23_2123 		0.867 1.000
ECM23
M07483_2.00 		Saccharomyces cerevisiae
NNAGATCNNNN
NNNNGATCTNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0293.1 		0.867 1.000
ECM23
M08566_2.00 		Saccharomyces cerevisiae
NNAGATCNNNN
NNNNGATCTNN		 Misc
DeBoer et al.(2011)
YPL021W_578 		0.867 1.000
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23503_YPL021W GATA 132 167

Links

Other GATA family TFs
Other Saccharomyces paradoxus TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZKSCAN5 Homo sapiens ENSG00000196652 D
Zkscan5 Mus musculus ENSMUSG00000055991 D
ZKSCAN5 Oryctolagus cuniculus ENSOCUG00000002447 I
ENSP00000377725-D1 Bos grunniens ENSP00000377725-D1 I
ENSP00000322872 Macaca fascicularis ENSP00000322872 I
ZKSCAN5 Tursiops truncatus ENSTTRG00000016188 I
ENSTSYG00000014107 Tarsius syrichta ENSTSYG00000014107 I
ENSSTOG00000019879 Ictidomys tridecemlineatus ENSSTOG00000019879 I
ZKSCAN5 Pteropus vampyrus ENSPVAG00000009665 I
ZKSCAN5 Pan troglodytes ENSPTRG00000019455 I
ENSPPYG00000017382 Pongo abelii ENSPPYG00000017382 I
ENSPANG00000000548 Papio anubis ENSPANG00000000548 I
ZKSCAN5 Otolemur garnettii ENSOGAG00000010899 I
ENSAMEG00000006213 Ailuropoda melanoleuca ENSAMEG00000006213 I
ENSNLEG00000011141 Nomascus leucogenys ENSNLEG00000011141 I
ZKSCAN5 Macaca mulatta ENSMMUG00000020141 I
ZKSCAN5 Gorilla gorilla ENSGGOG00000009555 I
ZKSCAN5 Equus caballus ENSECAG00000012353 I
ENSCSAG00000017802 Chlorocebus sabaeus ENSCSAG00000017802 I
ZKSCAN5 Callithrix jacchus ENSCJAG00000015788 I
ZKSCAN5 Canis familiaris ENSCAFG00000023158 I