23503_YPL021W (Saccharomyces paradoxus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 23503_YPL021W T197015_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ECM23
M00054_2.00 		Saccharomyces cerevisiae
DAGATCYV
BRGATCTH		 PBM
Badis et al.(2008)
ECM23_2123 		0.867 1.000
ECM23
M07483_2.00 		Saccharomyces cerevisiae
NNAGATCNNNN
NNNNGATCTNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0293.1 		0.867 1.000
ECM23
M08566_2.00 		Saccharomyces cerevisiae
NNAGATCNNNN
NNNNGATCTNN		 Misc
DeBoer et al.(2011)
YPL021W_578 		0.867 1.000
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23503_YPL021W GATA 132 167

Links

Other GATA family TFs
Other Saccharomyces paradoxus TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ECM23 Saccharomyces cerevisiae YPL021W D 0.867
22202_YPL021W Saccharomyces mikatae 22202_YPL021W I 0.867
SKUD_150104 Saccharomyces kudriavzevii SKUD_150104 I 0.856
24940_YPL021W Saccharomyces bayanus 24940_YPL021W I 0.824