SKUD_150104 (Saccharomyces kudriavzevii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 SKUD_150104 T195237_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ECM23
M00054_2.00 		Saccharomyces cerevisiae
DAGATCYV
BRGATCTH		 PBM
Badis et al.(2008)
ECM23_2123 		0.856 0.972
ECM23
M07483_2.00 		Saccharomyces cerevisiae
NNAGATCNNNN
NNNNGATCTNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0293.1 		0.856 0.972
ECM23
M08566_2.00 		Saccharomyces cerevisiae
NNAGATCNNNN
NNNNGATCTNN		 Misc
DeBoer et al.(2011)
YPL021W_578 		0.856 0.972
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT42004 GATA 132 167

Links

Other GATA family TFs
Other Saccharomyces kudriavzevii TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ECM23 Saccharomyces cerevisiae YPL021W D 0.856
22202_YPL021W Saccharomyces mikatae 22202_YPL021W I 0.856
23503_YPL021W Saccharomyces paradoxus 23503_YPL021W I 0.856
24940_YPL021W Saccharomyces bayanus 24940_YPL021W I 0.824
1998_YCR018C Saccharomyces mikatae 1998_YCR018C I 0.808