fgenesh1_pg.00866_#_575 (Aspergillus carbonarius)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 fgenesh1_pg.00866_#_575 T197076_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sub-1
M01235_2.00 		Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN		 PBM
Lambert et al.(2019)
pTH8614 		0.861 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.00866_#_575 GATA 448 483

Links

Other GATA family TFs
Other Aspergillus carbonarius TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.G01493 Eucalyptus grandis Eucgr.G01493 N
29801.m003163 Ricinus communis 29801.m003163 N
30170.m013700 Ricinus communis 30170.m013700 N
cassava46929.m1 Manihot esculenta cassava46929.m1 N
cassava47360.m1 Manihot esculenta cassava47360.m1 N
cassava9129.m1 Manihot esculenta cassava9129.m1 N
Cucsa.219850 Cucumis sativus Cucsa.219850 N
mgf020647m Mimulus guttatus mgf020647m N
Aquca_007_00701 Aquilegia coerulea Aquca_007_00701 N
Bostr.26675s0191 Boechera stricta Bostr.26675s0191 N
Cagra.2481s0020 Capsella grandiflora Cagra.2481s0020 N
Carubv10011964m.g Capsella rubella Carubv10011964m.g N
Ciclev10003973m.g Citrus clementina Ciclev10003973m.g N
Ciclev10030106m.g Citrus clementina Ciclev10030106m.g N
Pm021290 Prunus mume Pm021290 N
evm.TU.supercontig_21.177 Carica papaya evm.TU.supercontig_21.177 N
gene24577-v1.0-hybrid Fragaria vesca gene24577-v1.0-hybrid N
Gorai.002G135000 Gossypium raimondii Gorai.002G135000 N
Gorai.013G045100 Gossypium raimondii Gorai.013G045100 N
MDP0000484847 Malus domestica MDP0000484847 N
MDP0000713910 Malus domestica MDP0000713910 N
orange1.1g037241m.g Citrus sinensis orange1.1g037241m.g N
orange1.1g038084m.g Citrus sinensis orange1.1g038084m.g N
Pavir.J18412 Panicum virgatum Pavir.J18412 N
SapurV1A.0005s1150 Salix purpurea SapurV1A.0005s1150 N
SapurV1A.0423s0120 Salix purpurea SapurV1A.0423s0120 N
SapurV1A.0643s0100 Salix purpurea SapurV1A.0643s0100 N
Thhalv10012185m.g Eutrema salsugineum Thhalv10012185m.g N
POPTR_0014s02600 Populus trichocarpa POPTR_0014s02600 N
BHLH95 Arabidopsis thaliana AT1G49770 N
Bo5g076460 Brassica oleracea Bo5g076460 N
Bo6g018390 Brassica oleracea Bo6g018390 N
Bra018796 Brassica rapa Bra018796 N
Bra040671 Brassica rapa Bra040671 N
RGE1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003696 N
GLYMA02G11500 Glycine max GLYMA02G11500 N
GSMUA_Achr9G08780_001 Musa acuminata GSMUA_Achr9G08780_001 N
MTR_4g085700 Medicago truncatula MTR_4g085700 N
PGSC0003DMG400025780 Solanum tuberosum PGSC0003DMG400025780 N
PGSC0003DMG400025781 Solanum tuberosum PGSC0003DMG400025781 N
PGSC0003DMG400025783 Solanum tuberosum PGSC0003DMG400025783 N
RGE1 Populus trichocarpa POPTR_0001s31250 N
AMTR_s00017p00226990 Amborella trichopoda AMTR_s00017p00226990 N
PRUPE_ppa018148mg Prunus persica PRUPE_ppa018148mg N
Si009419m.g Setaria italica Si009419m.g N
Solyc01g057300.1 Solanum lycopersicum Solyc01g057300.1 N
Solyc01g107950.1 Solanum lycopersicum Solyc01g107950.1 N
TCM_007083 Theobroma cacao TCM_007083 N
TCM_033803 Theobroma cacao TCM_033803 N
RGE1 Vitis vinifera VIT_03s0063g00170 N
VIT_18s0001g10300 Vitis vinifera VIT_18s0001g10300 N
Ca_06466 Cicer arietinum Ca_06466 N
Ca_16375 Cicer arietinum Ca_16375 N
Cla016266 Citrullus lanatus Cla016266 N
Pm005302 Prunus mume Pm005302 N