CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc09374
(
Meloidogyne incognita
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Minc09374
T197152_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc09374
GATA
215
243
CFNCRVTQTKHWYKYLKEHYLCQPCHDYK
Links
Other
GATA
family TFs
Other
Meloidogyne incognita
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc10504
Meloidogyne incognita
Minc10504
N
0.867
Minc17415
Meloidogyne incognita
Minc17415
N
0.839
maker-nMf.1.1.scaf25550-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf25550-snap-gene-0.4
N
0.839
maker-nMf.1.1.scaf41294-augustus-gene-0.2
Meloidogyne floridensis
maker-nMf.1.1.scaf41294-augustus-gene-0.2
N
0.867