CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf25550-snap-gene-0.4
(
Meloidogyne floridensis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
maker-nMf.1.1.scaf25550-snap-gene-0.4
T197642_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf25550-snap-gene-0.4-mRNA-1
GATA
93
120
CFNCRVTQTKHWYKYLKENYLCKPCHDF
Links
Other
GATA
family TFs
Other
Meloidogyne floridensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc09374
Meloidogyne incognita
Minc09374
N
0.839
Minc10504
Meloidogyne incognita
Minc10504
N
0.839
maker-nMf.1.1.scaf41294-augustus-gene-0.2
Meloidogyne floridensis
maker-nMf.1.1.scaf41294-augustus-gene-0.2
N
0.839
Minc17415
Meloidogyne incognita
Minc17415
N
0.825