nLs.2.1.2.g04395 (Litomosoides sigmodontis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 nLs.2.1.2.g04395 T197704_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG13549
M01231_2.00 		Caenorhabditis briggsae
NTGATAAN
NTTATCAN		 PBM
Lambert et al.(2019)
pTH11492 		0.856 0.886
elt-6
M00666_2.00 		Caenorhabditis elegans
NTGATAAN
NTTATCAN		 PBM
Narasimhan et al.(2015)
pTH10707 		0.851 0.857
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t04395-RA GATA 268 302

Links

Other GATA family TFs
Other Litomosoides sigmodontis TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG13549 Caenorhabditis briggsae CBG13549 D 0.856
elt-6 Caenorhabditis elegans WBGene00001253 D 0.851
OFLC_0000492601 Onchocerca flexuosa OFLC_0000492601 I 0.867
L596_g25881 Steinernema carpocapsae L596_g25881 I 0.842
L889_g31947 Steinernema feltiae L889_g31947 I 0.842
L892_g6412 Steinernema scapterisci L892_g6412 I 0.842
L893_g28710 Steinernema glaseri L893_g28710 I 0.842
L898_g8209 Steinernema monticolum L898_g8209 I 0.842
maker-nMf.1.1.scaf08707-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf08707-augustus-gene-0.3 I 0.853
nAv.1.0.1.g03924 Acanthocheilonema viteae nAv.1.0.1.g03924 I 0.867
NBR_0001940901 Nippostrongylus brasiliensis NBR_0001940901 I 0.842
nDi.2.2.2.g02293 Dirofilaria immitis nDi.2.2.2.g02293 I 0.856
NECAME_05031 Necator americanus NECAME_05031 I 0.856
nOo.2.0.1.g08948 Onchocerca ochengi nOo.2.0.1.g08948 I 0.867
nRc.2.0.1.g15145 Romanomermis culicivorax nRc.2.0.1.g15145 I 0.855
OESDEN_09249 Oesophagostomum dentatum OESDEN_09249 I 0.856
Hba_15007 Heterorhabditis bacteriophora Hba_15007 I 0.856
PTRK_0001379700 Parastrongyloides trichosuri PTRK_0001379700 I 0.850
RSKR_0000556500 Rhabditophanes kr3021 RSKR_0000556500 I 0.836
SBAD_0000818101 Soboliphyme baturini SBAD_0000818101 I 0.855
scaffold1024-EXSNAP2012.4 Pristionchus exspectatus scaffold1024-EXSNAP2012.4 I 0.856
scaffold1033-EXSNAP2012.2 Pristionchus exspectatus scaffold1033-EXSNAP2012.2 I 0.856
SMUV_0001093901 Syphacia muris SMUV_0001093901 I 0.850
SPAL_0001590300 Strongyloides papillosus SPAL_0001590300 I 0.850
SSTP_0001171300 Strongyloides stercoralis SSTP_0001171300 I 0.850
SVE_0995400 Strongyloides venezuelensis SVE_0995400 I 0.850
TCLT_0000574501 Thelazia callipaeda TCLT_0000574501 I 0.867
ACAC_0000752101 Angiostrongylus cantonensis ACAC_0000752101 I 0.856
Bm4254 Brugia malayi Bm4254 I 0.867
CBG13548 Caenorhabditis briggsae CBG13548 I 0.850
CBN10937 Caenorhabditis brenneri CBN10937 I 0.850
CJA11149 Caenorhabditis japonica CJA11149 I 0.867
CJA18864 Caenorhabditis japonica CJA18864 I 0.850
CRE31380 Caenorhabditis remanei CRE31380 I 0.856
CRE31381 Caenorhabditis remanei CRE31381 I 0.850
LOAG_07460 Loa loa LOAG_07460 I 0.867
egl-18 Caenorhabditis elegans WBGene00001186 I 0.850
WBGene00241875 Onchocerca volvulus WBGene00241875 I 0.867
Minc08374 Meloidogyne incognita Minc08374 I 0.853
HCOI01886300 Haemonchus contortus HCOI01886300 I 0.842
ACOC_0000580401 Angiostrongylus costaricensis ACOC_0000580401 I 0.856
ALUE_0001545901 Ascaris lumbricoides ALUE_0001545901 I 0.856
ANCCAN_00554 Ancylostoma caninum ANCCAN_00554 I 0.856
ANCCEY_12899 Ancylostoma ceylanicum ANCCEY_12899 I 0.856
ASIM_0001333801 Anisakis simplex ASIM_0001333801 I 0.856
ASU_04064 Ascaris suum ASU_04064 I 0.856
BXY_0772600 Bursaphelenchus xylophilus BXY_0772600 I 0.855
DICVIV_08848 Dictyocaulus viviparus DICVIV_08848 I 0.856
EVEC_0001284001 Enterobius vermicularis EVEC_0001284001 I 0.851
GPLIN_000855200 Globodera pallida GPLIN_000855200 I 0.867
WUBG_10387 Wuchereria bancrofti WUBG_10387 I 0.867