CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN10937
(
Caenorhabditis brenneri
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CBN10937
T192152_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG13549
M01231_2.00
Caenorhabditis briggsae
NTGATAAN
NTTATCAN
PBM
Lambert et al.(2019)
pTH11492
0.850
0.771
elt-6
M00666_2.00
Caenorhabditis elegans
NTGATAAN
NTTATCAN
PBM
Narasimhan et al.(2015)
pTH10707
0.850
0.771
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN10937
GATA
297
331
CSNCQTDKTTAWRRDADGKLVCNPCGLYYRLHKVR
Links
Other
GATA
family TFs
Other
Caenorhabditis brenneri
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CJA18864
Caenorhabditis japonica
CJA18864
I
0.856
CRE31381
Caenorhabditis remanei
CRE31381
I
0.856
CBG13548
Caenorhabditis briggsae
CBG13548
I
0.856
egl-18
Caenorhabditis elegans
WBGene00001186
I
0.856
SPAL_0001590300
Strongyloides papillosus
SPAL_0001590300
I
0.851
SSTP_0001171300
Strongyloides stercoralis
SSTP_0001171300
I
0.851
SBAD_0000818101
Soboliphyme baturini
SBAD_0000818101
I
0.851
PTRK_0001379700
Parastrongyloides trichosuri
PTRK_0001379700
I
0.851
nRc.2.0.1.g15145
Romanomermis culicivorax
nRc.2.0.1.g15145
I
0.851
SVE_0995400
Strongyloides venezuelensis
SVE_0995400
I
0.851
BXY_0772600
Bursaphelenchus xylophilus
BXY_0772600
I
0.851
nAv.1.0.1.g03924
Acanthocheilonema viteae
nAv.1.0.1.g03924
I
0.850
CJA11149
Caenorhabditis japonica
CJA11149
I
0.850
scaffold1024-EXSNAP2012.4
Pristionchus exspectatus
scaffold1024-EXSNAP2012.4
I
0.850
scaffold1033-EXSNAP2012.2
Pristionchus exspectatus
scaffold1033-EXSNAP2012.2
I
0.850
LOAG_07460
Loa loa
LOAG_07460
I
0.850
CRE31380
Caenorhabditis remanei
CRE31380
I
0.850
nDi.2.2.2.g02293
Dirofilaria immitis
nDi.2.2.2.g02293
I
0.850
NECAME_05031
Necator americanus
NECAME_05031
I
0.850
OFLC_0000492601
Onchocerca flexuosa
OFLC_0000492601
I
0.850
Bm4254
Brugia malayi
Bm4254
I
0.850
OESDEN_09249
Oesophagostomum dentatum
OESDEN_09249
I
0.850
CBG13549
Caenorhabditis briggsae
CBG13549
D
0.850
nLs.2.1.2.g04395
Litomosoides sigmodontis
nLs.2.1.2.g04395
I
0.850
nOo.2.0.1.g08948
Onchocerca ochengi
nOo.2.0.1.g08948
I
0.850
WBGene00241875
Onchocerca volvulus
WBGene00241875
I
0.850
elt-6
Caenorhabditis elegans
WBGene00001253
D
0.850
ANCCAN_00554
Ancylostoma caninum
ANCCAN_00554
I
0.850
ANCCEY_12899
Ancylostoma ceylanicum
ANCCEY_12899
I
0.850
ALUE_0001545901
Ascaris lumbricoides
ALUE_0001545901
I
0.850
ACOC_0000580401
Angiostrongylus costaricensis
ACOC_0000580401
I
0.850
TCLT_0000574501
Thelazia callipaeda
TCLT_0000574501
I
0.850
ACAC_0000752101
Angiostrongylus cantonensis
ACAC_0000752101
I
0.850
ASIM_0001333801
Anisakis simplex
ASIM_0001333801
I
0.850
ASU_04064
Ascaris suum
ASU_04064
I
0.850
GPLIN_000855200
Globodera pallida
GPLIN_000855200
I
0.850
WUBG_10387
Wuchereria bancrofti
WUBG_10387
I
0.850
DICVIV_08848
Dictyocaulus viviparus
DICVIV_08848
I
0.850
Hba_15007
Heterorhabditis bacteriophora
Hba_15007
I
0.850
SMUV_0001093901
Syphacia muris
SMUV_0001093901
I
0.847
EVEC_0001284001
Enterobius vermicularis
EVEC_0001284001
I
0.845
RSKR_0000556500
Rhabditophanes kr3021
RSKR_0000556500
I
0.838
HCOI01886300
Haemonchus contortus
HCOI01886300
I
0.836
L889_g31947
Steinernema feltiae
L889_g31947
I
0.836
L596_g25881
Steinernema carpocapsae
L596_g25881
I
0.836
Minc08374
Meloidogyne incognita
Minc08374
I
0.836
L892_g6412
Steinernema scapterisci
L892_g6412
I
0.836
L893_g28710
Steinernema glaseri
L893_g28710
I
0.836
maker-nMf.1.1.scaf08707-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf08707-augustus-gene-0.3
I
0.836
L898_g8209
Steinernema monticolum
L898_g8209
I
0.836
NBR_0001940901
Nippostrongylus brasiliensis
NBR_0001940901
I
0.836