Ogr16171 (Ophisaurus gracilis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 Ogr16171 T199553_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr16171 Grainyhead 31 252

Links

Other Grainyhead family TFs
Other Ophisaurus gracilis TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB114 Arabidopsis thaliana AT1G66380 I
ORUFI03G21780 Oryza rufipogon ORUFI03G21780 N
PGSC0003DMG400013965 Solanum tuberosum PGSC0003DMG400013965 N
PGSC0003DMG400013966 Solanum tuberosum PGSC0003DMG400013966 N
VIT_02s0033g00370 Vitis vinifera VIT_02s0033g00370 N
Pm029437 Prunus mume Pm029437 N
Pm029444 Prunus mume Pm029444 N
Cagra.0463s0005 Capsella grandiflora Cagra.0463s0005 N
Eucgr.F02843 Eucalyptus grandis Eucgr.F02843 N
Eucgr.F02845 Eucalyptus grandis Eucgr.F02845 N
gene26513-v1.0-hybrid Fragaria vesca gene26513-v1.0-hybrid N
Lus10006541.g Linum usitatissimum Lus10006541.g N
MDP0000127691 Malus domestica MDP0000127691 N
MDP0000317257 Malus domestica MDP0000317257 N
SapurV1A.0230s0230 Salix purpurea SapurV1A.0230s0230 N